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The analysis of digital images using homological procedures is an outstanding topic in the area of Computational Algebraic Topology. In this paper, we describe a certified reduction strategy to deal with digital images, but preserving their…

Logic in Computer Science · Computer Science 2016-08-11 María Poza , César Domínguez , Jónathan Heras , Julio Rubio

Topological data analysis and its main method, persistent homology, provide a toolkit for computing topological information of high-dimensional and noisy data sets. Kernels for one-parameter persistent homology have been established to…

Machine Learning · Computer Science 2019-06-06 René Corbet , Ulderico Fugacci , Michael Kerber , Claudia Landi , Bei Wang

Understanding structure-property relationships in complex materials requires integrating complementary measurements across multiple length scales. Here we propose an interpretable "multimodal" machine learning framework that unifies…

Materials Science · Physics 2026-02-03 Shun Muroga , Hideaki Nakajima , Taiyo Shimizu , Kazufumi Kobashi , Kenji Hata

This work incorporates topological features via persistence diagrams to classify point cloud data arising from materials science. Persistence diagrams are multisets summarizing the connectedness and holes of given data. A new distance on…

Machine Learning · Statistics 2019-11-11 Vasileios Maroulas , Cassie Putman Micucci , Adam Spannaus

Muons and other ionizing radiation produced by cosmic rays and radiative decays affect CMOS/CCD sensor. When particles colliding with sensors atoms cause specific kind of noise on images recorded by cameras. We present a concept and…

Spatially referenced datasets have become increasingly prevalent across many fields, largely driven by advances in data collection methods such as satellite remote sensing. In many applications, predictions at unobserved locations are…

Computation · Statistics 2026-05-19 Isaac Amouzou , Ben Seiyon Lee

Persistence diagrams have been widely recognized as a compact descriptor for characterizing multiscale topological features in data. When many datasets are available, statistical features embedded in those persistence diagrams can be…

Algebraic Topology · Mathematics 2017-07-07 Ippei Obayashi , Yasuaki Hiraoka

Persistent homology is an area within topological data analysis (TDA) that can uncover different dimensional holes (connected components, loops, voids, etc.) in data. The holes are characterized, in part, by how long they persist across…

Methodology · Statistics 2025-04-08 Sixtus Dakurah , Jessi Cisewski-Kehe

Single-shot imaging with femtosecond X-ray lasers is a powerful measurement technique that can achieve both high spatial and temporal resolution. However, its accuracy has been severely limited by the difficulty of applying conventional…

In this paper, we derive a simple method for separating topological noise from topological features using a novel measure for comparing persistence barcodes called persistent entropy.

Information Theory · Computer Science 2016-05-11 Nieves Atienza , Rocio Gonzalez-Diaz , Matteo Rucco

In medical image analysis, feature engineering plays an important role in the design and performance of machine learning models. Persistent homology (PH), from the field of topological data analysis (TDA), demonstrates robustness and…

Computer Vision and Pattern Recognition · Computer Science 2025-06-05 Dashti A. Ali , Richard K. G. Do , William R. Jarnagin , Aras T. Asaad , Amber L. Simpson

In this work we train a neural network to identify impurities in the experimental images obtained by the scanning tunneling microscope measurements. The neural network is first trained with large number of simulated data and then the…

Strongly Correlated Electrons · Physics 2020-12-02 Ce Wang , Haiwei Li , Zhenqi Hao , Xintong Li , Cangwei Zou , Peng Cai , Yayu Wang , Yi-Zhuang You , Hui Zhai

This study developed a novel method for detecting hypernuclear events recorded in nuclear emulsion sheets using machine learning techniques. The artificial neural network-based object detection model was trained on surrogate images created…

Persistent homology is a relatively new tool often used for \emph{qualitative} analysis of intrinsic topological features in images and data originated from scientific and engineering applications. In this paper, we report novel…

Biomolecules · Quantitative Biology 2014-12-09 Kelin Xia , Xin Feng , Yiying Tong , Guo Wei We

Persistent homology is a natural tool for probing the topological characteristics of weighted graphs, essentially focusing on their $0$-dimensional homology. While this area has been substantially studied, we present a new approach to…

Algebraic Topology · Mathematics 2023-10-03 Omer Bobrowski , Primoz Skraba

Persistent homology has been devised as a promising tool for the topological simplification of complex data. However, it is computationally intractable for large data sets. In this work, we introduce multiresolution persistent homology for…

Biomolecules · Quantitative Biology 2015-04-02 Kelin Xia , Zhixiong Zhao , Guo-Wei Wei

Feature selection is an important tool to deal with high dimensional data. In unsupervised case, many popular algorithms aim at maintaining the structure of the original data. In this paper, we propose a simple and effective feature…

Machine Learning · Statistics 2020-04-06 Xiaoyun Li , Chengxi Wu , Ping Li

Time-delay embedding is a fundamental technique in Topological Data Analysis (TDA) for reconstructing the phase space dynamics of time-series data. Persistent homology effectively identifies global topological features, such as loops…

Statistics Theory · Mathematics 2026-04-21 Donghyun Park , Junhyun An , Taehyoung Kim , Jisu Kim

Computational topologists recently developed a method, called persistent homology to analyze data presented in terms of similarity or dissimilarity. Indeed, persistent homology studies the evolution of topological features in terms of a…

Quantitative Methods · Quantitative Biology 2017-08-01 Pavel Petrov , Stephen T Rush , Zhichun Zhai , Christine H Lee , Peter T Kim , Giseon Heo

Deep learning methods have demonstrated outstanding performances on classification and regression tasks on homogeneous data types (e.g., image, audio, and text data). However, tabular data still pose a challenge, with classic machine…

Machine Learning · Computer Science 2023-11-15 Antonio Briola , Yuanrong Wang , Silvia Bartolucci , Tomaso Aste