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We propose a novel benchmarking methodology for graph neural networks (GNNs) based on the graph alignment problem, a combinatorial optimization task that generalizes graph isomorphism by aligning two unlabeled graphs to maximize overlapping…

Machine Learning · Computer Science 2025-05-20 Adrien Lagesse , Marc Lelarge

This work studies fundamental limits for recovering the underlying correspondence among multiple correlated graphs. In the setting of inhomogeneous random graphs, we present and analyze a matching algorithm: first partially match the graphs…

Data Structures and Algorithms · Computer Science 2025-07-01 Taha Ameen , Bruce Hajek

Subgraph matching in logic circuits is foundational for numerous Electronic Design Automation (EDA) applications, including datapath optimization, arithmetic verification, and hardware trojan detection. However, existing techniques rely…

Artificial Intelligence · Computer Science 2025-10-09 Ziyang Zheng , Kezhi Li , Zhengyuan Shi , Qiang Xu

Network alignment is a problem of finding the node mapping between similar networks. It links the data from separate sources and is widely studied in bioinformation and social network fields. The critical difference between network…

Social and Information Networks · Computer Science 2021-07-26 Hailong Li , Naiyue Chen

Approximate subgraph matching, which is an important primitive for many applications like question answering, community detection, and motif discovery, often involves large labeled graphs such as knowledge graphs, social networks, and…

Databases · Computer Science 2021-08-19 Shubhangi Agarwal , Sourav Dutta , Arnab Bhattacharya

We study the problem of detecting the edge correlation between two random graphs with $n$ unlabeled nodes. This is formalized as a hypothesis testing problem, where under the null hypothesis, the two graphs are independently generated;…

Statistics Theory · Mathematics 2021-02-09 Yihong Wu , Jiaming Xu , Sophie H. Yu

In this paper, matching pairs of stocahstically generated graphs in the presence of generalized seed side-information is considered. The graph matching problem emerges naturally in various applications such as social network…

Information Theory · Computer Science 2021-02-15 Mahshad Shariatnasab , Farhad Shirani , Siddharth Garg , Elza Erkip

We consider fair network topology inference from nodal observations. Real-world networks often exhibit biased connections based on sensitive nodal attributes. Hence, different subpopulations of nodes may not share or receive information…

Signal Processing · Electrical Eng. & Systems 2024-03-26 Madeline Navarro , Samuel Rey , Andrei Buciulea , Antonio G. Marques , Santiago Segarra

Subgraph isomorphism is a well-known NP-hard problem that is widely used in many applications, such as social network analysis and query over the knowledge graph. Due to the inherent hardness, its performance is often a bottleneck in…

Databases · Computer Science 2021-04-21 Li Zeng , Lei Zou , M. Tamer Özsu , Lin Hu , Fan Zhang

This thesis studies the graph alignment problem, the noisy version of the graph isomorphism problem, which aims to find a matching between the nodes of two graphs which preserves most of the edges. Focusing on the planted version where the…

Data Structures and Algorithms · Computer Science 2024-04-22 Luca Ganassali

Subgraph matching is challenging as it necessitates time-consuming combinatorial searches. Recent Graph Neural Network (GNN)-based approaches address this issue by employing GNN encoders to extract graph information and hinge distance…

Machine Learning · Computer Science 2025-10-02 Zhouyang Liu , Ning Liu , Yixin Chen , Jiezhong He , Menghan Jia , Dongsheng Li

Unsupervised graph alignment aims to find the node correspondence across different graphs without any anchor node pairs. Despite the recent efforts utilizing deep learning-based techniques, such as the embedding and optimal transport…

Machine Learning · Computer Science 2026-03-10 Songyang Chen , Youfang Lin , Yu Liu , Shuai Zheng , Lei Zou

In most work to date, graph signal sampling and reconstruction algorithms are intrinsically tied to graph properties, assuming bandlimitedness and optimal sampling set choices. However, practical scenarios often defy these assumptions,…

Signal Processing · Electrical Eng. & Systems 2024-01-23 Darukeesan Pakiyarajah , Eduardo Pavez , Antonio Ortega

For graph classification tasks, many traditional kernel methods focus on measuring the similarity between graphs. These methods have achieved great success on resolving graph isomorphism problems. However, in some classification problems,…

Machine Learning · Computer Science 2021-02-18 Jianming Huang , Hiroyuki Kasai

Graph Isomorphism is one of the classical problems of graph theory for which no deterministic polynomial-time algorithm is currently known, but has been neither proven to be NP-complete. Several heuristic algorithms have been proposed to…

Social and Information Networks · Computer Science 2015-11-23 Natarajan Meghanathan

The successful integration of graph neural networks into recommender systems (RSs) has led to a novel paradigm in collaborative filtering (CF), graph collaborative filtering (graph CF). By representing user-item data as an undirected,…

The graph matching optimization problem is an essential component for many tasks in computer vision, such as bringing two deformable objects in correspondence. Naturally, a wide range of applicable algorithms have been proposed in the last…

Computer Vision and Pattern Recognition · Computer Science 2022-08-01 Stefan Haller , Lorenz Feineis , Lisa Hutschenreiter , Florian Bernard , Carsten Rother , Dagmar Kainmüller , Paul Swoboda , Bogdan Savchynskyy

A subgraph is constructed by using a subset of vertices and edges of a given graph. There exist many graph properties that are hereditary for subgraphs. Hence, researchers from different communities have paid a great deal of attention in…

Combinatorics · Mathematics 2023-06-06 Kai Siong Yow , Ningyi Liao , Siqiang Luo , Reynold Cheng , Chenhao Ma , Xiaolin Han

The success of graph embeddings or node representation learning in a variety of downstream tasks, such as node classification, link prediction, and recommendation systems, has led to their popularity in recent years. Representation learning…

Machine Learning · Computer Science 2018-09-07 Saba A. Al-Sayouri , Danai Koutra , Evangelos E. Papalexakis , Sarah S. Lam

Existing multiplex graph models often assume homophily, where connected nodes tend to belong to the same class or share similar attributes. Consequently, these models may struggle with graphs exhibiting heterophily, where connected nodes…

Machine Learning · Computer Science 2026-05-14 Kamel Abdous , Nairouz Mrabah , Mohamed Bouguessa