Related papers: The trace reconstruction problem for spider graphs
We estimate the minimum number of distance queries that is sufficient to reconstruct the binomial random graph $G(n,p)$ with constant diameter with high probability. We get a tight (up to a constant factor) answer for all $p>n^{-1+o(1)}$…
The graph reconstruction problem has been extensively studied under various query models. In this paper, we propose a new query model regarding the number of connected components, which is one of the most basic and fundamental graph…
The \textsc{Co-Path/Cycle Packing} problem (resp. The \textsc{Co-Path Packing} problem) asks whether we can delete at most $k$ vertices from the input graph such that the remaining graph is a collection of induced paths and cycles (resp.…
Computing the edge expansion of a graph is a famously hard combinatorial problem for which there have been many approximation studies. We present two variants of exact algorithms using semidefinite programming (SDP) to compute this constant…
For a graph class $\Pi$, the $\Pi$-Vertex Deletion problem has as input an undirected graph $G=(V,E)$ and an integer $k$ and asks whether there is a set of at most $k$ vertices that can be deleted from $G$ such that the resulting graph is a…
This paper presents the first parallel batch-dynamic algorithms for computing spanners and sparsifiers. Our algorithms process any batch of edge insertions and deletions in an $n$-node undirected graph, in $\text{poly}(\log n)$ depth and…
We propose a modification to the random destruction of graphs: Given a finite network with a distinguished set of sources and targets, remove (cut) vertices at random, discarding components that do not contain a source node. We investigate…
Motivated by applications in network epidemiology, we consider the problem of determining whether it is possible to delete at most $k$ edges from a given input graph (of small treewidth) so that the resulting graph avoids a set…
Let $P$ be a set of $n$ points in $\mathbb{R}^d$, and let $\varepsilon,\psi \in (0,1)$ be parameters. Here, we consider the task of constructing a $(1+\varepsilon)$-spanner for $P$, where every edge might fail (independently) with…
A spanner of a graph is a subgraph that preserves lengths of shortest paths up to a multiplicative distortion. For every $k$, a spanner with size $O(n^{1+1/k})$ and stretch $(2k+1)$ can be constructed by a simple centralized greedy…
The class of graph deletion problems has been extensively studied in theoretical computer science, particularly in the field of parameterized complexity. Recently, a new notion of graph deletion problems was introduced, called deletion to…
In 3-D reconstruction problems, the image data obtained from cryo electron microscopy is the projection of many heterogeneous instances of the object under study (e.g., a virus). When the object is heterogeneous but has an overall symmetry,…
In this paper, we consider the planted partition model, in which $n = ks$ vertices of a random graph are partitioned into $k$ "clusters," each of size $s$. Edges between vertices in the same cluster and different clusters are included with…
Aligning a sequence to a walk in a labeled graph is a problem of fundamental importance to Computational Biology. For finding a walk in an arbitrary graph with $|E|$ edges that exactly matches a pattern of length $m$, a lower bound based on…
We analyze the computational complexity of the following computational problems called Bounded-Density Edge Deletion and Bounded-Density Vertex Deletion: Given a graph $G$, a budget $k$ and a target density $\tau_\rho$, are there $k$ edges…
Let $\Pi$ be a hereditary graph class. The problem of deletion to $\Pi$, takes as input a graph $G$ and asks for a minimum number (or a fixed integer $k$) of vertices to be deleted from $G$ so that the resulting graph belongs to $\Pi$. This…
We describe a method that will reconstruct an unrooted binary phylogenetic level-1 network on n taxa from the set of all quartets containing a certain fixed taxon, in O(n^3) time. We also present a more general method which can handle more…
Constructing a sparse spanning subgraph is a fundamental primitive in graph theory. In this paper, we study this problem in the Centralized Local model, where the goal is to decide whether an edge is part of the spanning subgraph by…
A tree $\sigma$-spanner of a positively real-weighted $n$-vertex and $m$-edge undirected graph $G$ is a spanning tree $T$ of $G$ which approximately preserves (i.e., up to a multiplicative stretch factor $\sigma$) distances in $G$. Tree…
Motivated by polymer-based data-storage platforms that use chains of binary synthetic polymers as the recording media and read the content via tandem mass spectrometers, we propose a new family of codes that allows for unique string…