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When implementing functionality which requires sparse matrices, there are numerous storage formats to choose from, each with advantages and disadvantages. To achieve good performance, several formats may need to be used in one program,…

Mathematical Software · Computer Science 2019-10-22 Conrad Sanderson , Ryan Curtin

Despite the importance of sparse matrices in numerous fields of science, software implementations remain difficult to use for non-expert users, generally requiring the understanding of underlying details of the chosen sparse matrix storage…

Mathematical Software · Computer Science 2019-07-23 Conrad Sanderson , Ryan Curtin

Reservoir computing systems rely on the recurrent multiplication of a very large, sparse, fixed matrix. We argue that direct spatial implementation of these fixed matrices minimizes the work performed in the computation, and allows for…

Hardware Architecture · Computer Science 2021-01-25 Matthew Denton , Herman Schmit

Sparse-dense linear algebra is crucial in many domains, but challenging to handle efficiently on CPUs, GPUs, and accelerators alike; multiplications with sparse formats like CSR and CSF require indirect memory lookups. In this work, we…

Hardware Architecture · Computer Science 2020-12-15 Paul Scheffler , Florian Zaruba , Fabian Schuiki , Torsten Hoefler , Luca Benini

This paper presents a low-overhead optimizer for the ubiquitous sparse matrix-vector multiplication (SpMV) kernel. Architectural diversity among different processors together with structural diversity among different sparse matrices lead to…

Performance · Computer Science 2017-11-16 Athena Elafrou , Georgios Goumas , Nektarios Koziris

The increasing importance of multicore processors calls for a reevaluation of established numerical algorithms in view of their ability to profit from this new hardware concept. In order to optimize the existent algorithms, a detailed…

Performance · Computer Science 2012-03-01 Gerald Schubert , Georg Hager , Holger Fehske

We present a sparse linear system solver that is based on a multifrontal variant of Gaussian elimination, and exploits low-rank approximation of the resulting dense frontal matrices. We use hierarchically semiseparable (HSS) matrices, which…

Mathematical Software · Computer Science 2015-02-27 Pieter Ghysels , Xiaoye S. Li , Francois-Henry Rouet , Samuel Williams , Artem Napov

This paper addresses spatial programming of sparse matrix computations for productive performance. The challenge is how to express an irregular computation and its optimizations in a regular way. A sparse matrix has (non-zero) values and a…

Mathematical Software · Computer Science 2018-10-18 Hongbo Rong

We implement two novel algorithms for sparse-matrix dense-matrix multiplication (SpMM) on the GPU. Our algorithms expect the sparse input in the popular compressed-sparse-row (CSR) format and thus do not require expensive format conversion.…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-06-13 Carl Yang , Aydin Buluc , John D. Owens

Several manufacturers have already started to commercialize near-bank Processing-In-Memory (PIM) architectures. Near-bank PIM architectures place simple cores close to DRAM banks and can yield significant performance and energy improvements…

Hardware Architecture · Computer Science 2022-04-05 Christina Giannoula , Ivan Fernandez , Juan Gómez-Luna , Nectarios Koziris , Georgios Goumas , Onur Mutlu

We suggest a technique to reduce the storage size of sparse matrices at no loss of information. We call this technique Diagonally-Adressed (DA) storage. It exploits the typically low matrix bandwidth of matrices arising in applications. For…

Numerical Analysis · Mathematics 2025-01-24 Jens Saak , Jonas Schulze

Tomographic imaging has benefited from advances in X-ray sources, detectors and optics to enable novel observations in science, engineering and medicine. These advances have come with a dramatic increase of input data in the form of faster…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-25 Stefano Marchesini , Anuradha Trivedi , Pablo Enfedaque , Talita Perciano , Dilworth Parkinson

Several manufacturers have already started to commercialize near-bank Processing-In-Memory (PIM) architectures. Near-bank PIM architectures place simple cores close to DRAM banks and can yield significant performance and energy improvements…

Hardware Architecture · Computer Science 2022-05-24 Christina Giannoula , Ivan Fernandez , Juan Gómez-Luna , Nectarios Koziris , Georgios Goumas , Onur Mutlu

Sparse matrix multiplication (SpGEMM) is a fundamental kernel used in many diverse application areas, both numerical and discrete. For example, many algebraic graph algorithms rely on SpGEMM in the tropical semiring to compute shortest…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-01 Alexander van der Grinten , Geert Custers , Duy Le Thanh , Henning Meyerhenke

We design and develop a work-efficient multithreaded algorithm for sparse matrix-sparse vector multiplication (SpMSpV) where the matrix, the input vector, and the output vector are all sparse. SpMSpV is an important primitive in the…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-26 Ariful Azad , Aydin Buluc

We present a novel, practical approach to speed up sparse matrix-vector multiplication (SpMVM) on GPUs. The novel key idea is to apply lossless entropy coding to further compress the sparse matrix when stored in one of the commonly…

Performance · Computer Science 2026-03-03 Emil Schätzle , Tommaso Pegolotti , Markus Püschel

Despite numerous efforts for optimizing the performance of Sparse Matrix and Vector Multiplication (SpMV) on modern hardware architectures, few works are done to its sparse counterpart, Sparse Matrix and Sparse Vector Multiplication…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-18 Min Li , Yulong Ao , Chao Yang

Multiplication of a sparse matrix to a dense matrix (SpDM) is widely used in many areas like scientific computing and machine learning. However, existing works under-look the performance optimization of SpDM on modern many-core…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-01 Shaohuai Shi , Qiang Wang , Xiaowen Chu

Iterative solutions of sparse linear systems and sparse eigenvalue problems have a fundamental role in vital fields of scientific research and engineering. The crucial computing kernel for such iterative solutions is the multiplication of a…

Data Structures and Algorithms · Computer Science 2022-12-16 Thaha Mohammed , Rashid Mehmood

Sparse storage formats are techniques for storing and processing the sparse matrix data efficiently. The performance of these storage formats depend upon the distribution of non-zeros, within the matrix in different dimensions. In order to…

Mathematical Software · Computer Science 2012-02-28 Muhammad Taimoor Khan , Anila Usman