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This note describes the development of an exact solver for Minimal Directed Feedback Vertex Set as part of the PACE 2022 competition. The solver is powered largely by aggressively trying to reduce the DFVS problem to a Minimal Cover…

Data Structures and Algorithms · Computer Science 2022-08-03 Alex Meiburg

For any finite set $\mathcal{H} = \{H_1,\ldots,H_p\}$ of graphs, a graph is $\mathcal{H}$-subgraph-free if it does not contain any of $H_1,\ldots,H_p$ as a subgraph. In recent work, meta-classifications have been studied: these show that if…

Data Structures and Algorithms · Computer Science 2023-05-03 Matthew Johnson , Barnaby Martin , Sukanya Pandey , Daniël Paulusma , Siani Smith , Erik Jan van Leeuwen

In this paper we study a maximization version of the classical Feedback Vertex Set (FVS) problem, namely, the Max Min FVS problem, in the realm of parameterized complexity. In this problem, given an undirected graph $G$, a positive integer…

Data Structures and Algorithms · Computer Science 2022-08-04 Ajinkya Gaikwad , Hitendra Kumar , Soumen Maity , Saket Saurabh , Shuvam Kant Tripathi

Graphs have been widely used in real-world applications, in which investigating relations between vertices is an important task. In this paper, we study the problem of generating the k-hop-constrained s-t simple path graph, i.e., the…

Data Structures and Algorithms · Computer Science 2023-04-26 Yuzheng Cai , Siyuan Liu , Weiguo Zheng , Xuemin Lin

Given a vertex-weighted graph $G=(V,E)$ and a set $S \subseteq V$, a subset feedback vertex set $X$ is a set of the vertices of $G$ such that the graph induced by $V \setminus X$ has no cycle containing a vertex of $S$. The \textsc{Subset…

Data Structures and Algorithms · Computer Science 2017-02-02 Charis Papadopoulos , Spyridon Tzimas

The phylogenetic tree construction is to infer the evolutionary relationship between species from the experimental data. However, the experimental data are often imperfect and conflicting each others. Therefore, it is important to extract…

Artificial Intelligence · Computer Science 2007-05-23 Andy Auyeung , Ajith Abraham

For the minimum cardinality vertex cover and maximum cardinality matching problems, the max-product form of belief propagation (BP) is known to perform poorly on general graphs. In this paper, we present an iterative loopy annealing BP…

Discrete Mathematics · Computer Science 2014-07-09 Marc Lelarge

We introduce a simple, efficient and precise polynomial heuristic for a key NP complete problem, minimum vertex cover. Our method is iterative and operates in probability space. Once a stable probability solution is found we find the true…

Statistical Mechanics · Physics 2007-05-23 P. M. Duxbury , C. W. Fay

We study the minimum dominating set problem as a representative combinatorial optimization challenge with a global topological constraint. The requirement that the backbone induced by the vertices of a dominating set should be a connected…

Data Analysis, Statistics and Probability · Physics 2023-10-25 Yusupjan Habibulla , Hai-Jun Zhou

In this note we study the computational complexity of feedback arc set counting problems in directed graphs, highlighting some subtle yet common properties of counting classes. Counting the number of feedback arc sets of cardinality $k$ and…

Discrete Mathematics · Computer Science 2022-03-11 Kevin Perrot

Leaf-Removal process has been widely researched and applied in many mathematical and physical fields to help understand the complex systems, and a lot of problems including the minimal vertex-cover are deeply related to this process and the…

Social and Information Networks · Computer Science 2019-07-24 Xiangnan Feng , Wei Wei , Xing Li , Zhiming Zheng

Given an input graph G and an integer k, the parameterized K_4-minor cover problem asks whether there is a set S of at most k vertices whose deletion results in a K_4-minor-free graph, or equivalently in a graph of treewidth at most 2. This…

Data Structures and Algorithms · Computer Science 2012-04-09 Eun Jung Kim , Christophe Paul , Geevarghese Philip

The NP-hard Odd Cycle Transversal problem asks for a minimum vertex set whose removal from an undirected input graph $G$ breaks all odd cycles, and thereby yields a bipartite graph. The problem is well-known to be fixed-parameter tractable…

Data Structures and Algorithms · Computer Science 2024-10-08 Bart M. P. Jansen , Yosuke Mizutani , Blair D. Sullivan , Ruben F. A. Verhaegh

The Subset Feedback Vertex Set problem (SFVS), to delete $k$ vertices from a given graph such that any vertex in a vertex subset (called a terminal set) is not in a cycle in the remaining graph, generalizes the famous Feedback Vertex Set…

Data Structures and Algorithms · Computer Science 2025-01-06 Tian Bai , Mingyu Xiao

The $K$-core of a graph is the unique maximum subgraph within which each vertex connects to $K$ or more other vertices. The optimal $K$-core attack problem asks to delete the minimum number of vertices from the $K$-core to induce its…

Disordered Systems and Neural Networks · Physics 2024-06-17 Jianwen Zhou , Hai-Jun Zhou

Given a graph $G=(V,E)$ and an integer $k \ge 1$, a $k$-hop dominating set $D$ of $G$ is a subset of $V$, such that, for every vertex $v \in V$, there exists a node $u \in D$ whose hop-distance from $v$ is at most $k$. A $k$-hop dominating…

Data Structures and Algorithms · Computer Science 2020-12-11 A. Karim Abu-Affash , Paz Carmi , Adi Krasin

The Vertex Cover problem plays an essential role in the study of polynomial kernelization in parameterized complexity, i.e., the study of provable and efficient preprocessing for NP-hard problems. Motivated by the great variety of positive…

Computational Complexity · Computer Science 2019-05-10 Eva-Maria C. Hols , Stefan Kratsch , Astrid Pieterse

Given a graph $G$ and an integer $k$, Max Min FVS asks whether there exists a minimal set of vertices of size at least $k$ whose deletion destroys all cycles. We present several results that improve upon the state of the art of the…

Data Structures and Algorithms · Computer Science 2025-03-24 Michael Lampis , Nikolaos Melissinos , Manolis Vasilakis

We initiate the algorithmic study of retracting a graph into a cycle in the graph, which seeks a mapping of the graph vertices to the cycle vertices, so as to minimize the maximum stretch of any edge, subject to the constraint that the…

Data Structures and Algorithms · Computer Science 2019-04-29 Samuel Haney , Mehraneh Liaee , Bruce M. Maggs , Debmalya Panigrahi , Rajmohan Rajaraman , Ravi Sundaram

In this paper, we use a new method to decrease the parameterized complexity bound for finding the minimum vertex cover of connected max-degree-3 undirected graphs. The key operation of this method is reduction of the size of a particular…

Data Structures and Algorithms · Computer Science 2015-03-17 Weiya Yue , John Franco , Weiwei Cao