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We study the influence of a graph parameter called modular-width on the time complexity for optimally solving well-known polynomial problems such as Maximum Matching, Triangle Counting, and Maximum $s$-$t$ Vertex-Capacitated Flow. The…

Data Structures and Algorithms · Computer Science 2018-04-27 Stefan Kratsch , Florian Nelles

This paper introduces a new specialized algorithm for equilibrium Monte Carlo sampling of binary-valued systems, which allows for large moves in the state space. This is achieved by constructing self-avoiding walks (SAWs) in the state…

Computation · Statistics 2011-11-29 Firas Hamze , Ziyu Wang , Nando de Freitas

Several kinds of walks on complex networks are currently used to analyze search and navigation in different systems. Many analytical and computational results are known for random walks on such networks. Self-avoiding walks (SAWs) are…

Disordered Systems and Neural Networks · Physics 2009-11-10 Carlos P. Herrero

Many combinatorial problems can be solved in time $O^*(c^{tw})$ on graphs of treewidth $tw$, for a problem-specific constant $c$. In several cases, matching upper and lower bounds on $c$ are known based on the Strong Exponential Time…

Computational Complexity · Computer Science 2018-06-28 Bas A. M. van Geffen , Bart M. P. Jansen , Arnoud A. W. M. de Kroon , Rolf Morel

We present two new and efficient algorithms for computing all-pairs shortest paths. The algorithms operate on directed graphs with real (possibly negative) weights. They make use of directed path consistency along a vertex ordering d. Both…

Data Structures and Algorithms · Computer Science 2014-01-21 Léon R. Planken , Mathijs M. de Weerdt , Roman P. J. van der Krogt

There are numerous examples of the so-called ``square root phenomenon'' in the field of parameterized algorithms: many of the most fundamental graph problems, parameterized by some natural parameter $k$, become significantly simpler when…

Data Structures and Algorithms · Computer Science 2022-10-03 Dániel Marx , Marcin Pilipczuk , Michał Pilipczuk

In this paper we investigate the existence of subexponential parameterized algorithms of three fundamental cycle-hitting problems in geometric graph classes. The considered problems, \textsc{Triangle Hitting} (TH), \textsc{Feedback Vertex…

Data Structures and Algorithms · Computer Science 2024-04-17 Gaétan Berthe , Marin Bougeret , Daniel Gonçalves , Jean-Florent Raymond

We describe a general purpose algorithm for counting simple cycles and simple paths of any length $\ell$ on a (weighted di)graph on $N$ vertices and $M$ edges, achieving a time complexity of $O\left(N+M+\big(\ell^\omega+\ell\Delta\big)…

Data Structures and Algorithms · Computer Science 2019-09-12 Pierre-Louis Giscard , Nils Kriege , Richard C. Wilson

Exclusion processes became paradigmatic models of nonequilibrium interacting particle systems of wide range applicability both across the natural and the applied, social and technological sciences. Usually they are defined as a…

Statistical Mechanics · Physics 2018-06-26 J. Ricardo G. Mendonça

We study the Shortest-Walk Problem (SWP) in a Graph of Convex Sets (GCS). A GCS is a graph where each vertex is paired with a convex program, and each edge couples adjacent programs via additional costs and constraints. A walk in a GCS is a…

We study the classic problem of subgraph counting, where we wish to determine the number of occurrences of a fixed pattern graph $H$ in an input graph $G$ of $n$ vertices. Our focus is on bounded degeneracy inputs, a rich family of graph…

Data Structures and Algorithms · Computer Science 2025-03-05 Daniel Paul-Pena , C. Seshadhri

This work considers numerical methods for the time-dependent Schr\"{o}dinger equation of incommensurate systems. By using a plane wave method for spatial discretization, the incommensurate problem is lifted to a higher dimension that…

Computational Physics · Physics 2021-03-30 Ting Wang , Huajie Chen , Aihui Zhou , Yuzhi Zhou

We consider the problem of counting 4-cycles ($C_4$) in an undirected graph $G$ of $n$ vertices and $m$ edges (in bipartite graphs, 4-cycles are also often referred to as $\textit{butterflies}$). Most recently, Wang et al. (2019, 2022)…

Data Structures and Algorithms · Computer Science 2024-10-01 Paul Burkhardt , David G. Harris

Various types of walks on complex networks have been used in recent years to model search and navigation in several kinds of systems, with particular emphasis on random walks. This gives valuable information on network properties, but…

Disordered Systems and Neural Networks · Physics 2019-01-24 Carlos P. Herrero

Self-avoiding walks (SAW) are the source of very difficult problems in probabilities and enumerative combinatorics. They are also of great interest as they are, for instance, the basis of protein structure prediction in bioinformatics.…

Biomolecules · Quantitative Biology 2013-06-07 Jacques M. Bahi , Christophe Guyeux , Jean-Marc Nicod , Laurent Philippe

We study the problem of finding the cycle of minimum cost-to-time ratio in a directed graph with $ n $ nodes and $ m $ edges. This problem has a long history in combinatorial optimization and has recently seen interesting applications in…

Data Structures and Algorithms · Computer Science 2018-03-02 Karl Bringmann , Thomas Dueholm Hansen , Sebastian Krinninger

We study Clustered Planarity with Linear Saturators, which is the problem of augmenting an $n$-vertex planar graph whose vertices are partitioned into independent sets (called clusters) with paths - one for each cluster - that connect all…

Data Structures and Algorithms · Computer Science 2024-10-01 Giordano Da Lozzo , Robert Ganian , Siddharth Gupta , Bojan Mohar , Sebastian Ordyniak , Meirav Zehavi

We prove that the cycle space of every planar finitely separable 3-connected graph $G$ is generated by some ${\rm Aut}(G)$-invariant nested set of cycles. We also discuss the situation in the case of smaller connectivity.

Combinatorics · Mathematics 2014-12-12 Matthias Hamann

Random walks are a series of up, down, and level steps that enumerate distinct paths from $(0,0)$ to $(2n,0)$, where $n$ is the semi-length of the path. We used these paths to analyze Catalan, Schr\"{o}der, and Motzkin number sequences…

Combinatorics · Mathematics 2018-11-08 Tonia Bell , Shakuan Frankson , Nikita Sachdeva , Myka Terry

Performing random walks in networks is a fundamental primitive that has found applications in many areas of computer science, including distributed computing. In this paper, we focus on the problem of sampling random walks efficiently in a…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-02-20 Atish Das Sarma , Danupon Nanongkai , Gopal Pandurangan , Prasad Tetali
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