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Enhancement of the predictive power and robustness of nonlinear population dynamics models allows ecologists to make more reliable forecasts about species' long term survival. However, the limited availability of detailed ecological data,…

Pattern Formation and Solitons · Physics 2025-04-18 Indrajyoti Gaine , Malay Banerjee

We study a process of pattern formation for a generic model of species anchored to the nodes of a network where local reactions take place, and that experience non-reciprocal long-range interactions, encoded by the network directed links.…

Pattern Formation and Solitons · Physics 2025-10-22 Timoteo Carletti , Riccardo Muolo

Nonlocal interactions are ubiquitous in nature and play a central role in many biological systems. In this paper, we perform a bifurcation analysis of a widely-applicable advection-diffusion model with nonlocal advection terms describing…

Analysis of PDEs · Mathematics 2023-05-25 Valeria Giunta , Thomas Hillen , Mark A. Lewis , Jonathan R. Potts

We describe a method to extract from experimental data the important dynamical modes in spatio-temporal patterns in a system driven out of thermodynamic equilibrium. Using a novel optical technique for controlling fluid flow, we create an…

Fluid Dynamics · Physics 2011-05-03 Adam C. Perkins , Roman O. Grigoriev , Michael F. Schatz

Nature is a blossoming of regular structures, signature of self-organization of the underlying microscopic interacting agents. Turing theory of pattern formation is one of the most studied mechanisms to address such phenomena and has been…

Pattern Formation and Solitons · Physics 2025-10-22 Riccardo Muolo , Lorenzo Giambagli , Hiroya Nakao , Duccio Fanelli , Timoteo Carletti

A class of systems is considered, where immobile species associated to distinct patches, the nodes of a network, interact both locally and at a long-range, as specified by an (interaction) adjacency matrix. Non local interactions are…

Pattern Formation and Solitons · Physics 2020-06-30 Giulia Cencetti , Federico Battiston , Timoteo Carletti , Duccio Fanelli

A class of hyperbolic reaction--diffusion models with cross-diffusion is derived within the context of Extended Thermodynamics. Linear stability analysis is performed to study the nature of the equilibrium states against uniform and…

Pattern Formation and Solitons · Physics 2020-06-12 Carmela Currò , Giovanna Valenti

We report for the first time the pattern dynamics in the vicinity of an inverse homoclinic bifurcation in an extended dissipative system. We observe, in direct numerical simulations of three dimensional Rayleigh-B\'{e}nard convection, a…

Pattern Formation and Solitons · Physics 2014-02-13 Pinaki Pal , Krishna Kumar , Priyanka Maity , Syamal Kumar Dana

Pattern formation, arising from systems of autonomous reaction-diffusion equations, on networks has become a common topic of study in the scientific literature. In this work we focus primarily on directed networks. Although some work prior…

Pattern Formation and Solitons · Physics 2022-10-19 Joshua Ritchie

We investigate Turing pattern formation in a stochastic and spatially discretized version of a reaction diffusion advection (RDA) equation, which was previously introduced to model synaptogenesis in \textit{C. elegans}. The model describes…

Statistical Mechanics · Physics 2020-09-15 Hyunjoong Kim , Paul C. Bressloff

The spontaneous emergence of ordered structures, known as Turing patterns, in complex networks is a phenomenon that holds potential applications across diverse scientific fields, including biology, chemistry, and physics. Here, we present a…

Physics and Society · Physics 2023-09-26 Jiaying Zhou , Yong Ye , Alex Arenas , Sergio Gómez , Yi Zhao

Weakly nonlinear amplitude equations are derived for the onset of spatially extended patterns on a general class of n-component bulk-surface reaction-diffusion systems in a ball, under the assumption of linear kinetics in the bulk and…

Pattern Formation and Solitons · Physics 2025-05-27 Edgardo Villar-Sepúlveda , Alan R. Champneys , Davide Cusseddu , Anotida Madzvamuse

We discuss the nonlinear phenomena of irreversible tipping for non-autonomous systems where time-varying inputs correspond to a smooth "parameter shift" from one asymptotic value to another. We express tipping in terms of pullback…

Dynamical Systems · Mathematics 2018-04-24 Peter Ashwin , Clare Perryman , Sebastian Wieczorek

Motivated by recent experiments and models of biological segmentation, we analyze the exicitation of pattern-forming instabilities of convectively unstable reaction-diffusion-advection (RDA) systems, occuring by means of constant or…

Pattern Formation and Solitons · Physics 2009-11-10 Patrick N. McGraw , Michael Menzinger

Reaction-diffusion (Turing) systems are fundamental to the formation of spatial patterns in nature and engineering. These systems are governed by a set of non-linear partial differential equations containing parameters that determine the…

Machine Learning · Computer Science 2022-11-28 Jordon Kho , Winston Koh , Jian Cheng Wong , Pao-Hsiung Chiu , Chin Chun Ooi

The Turing pattern model is one type of reaction-diffusion (RD) model. The first identification of pattern formation by the Turing pattern model in an actual animal was made in the 1990s with the observation of patterns in the sea anemone.…

Quantitative Methods · Quantitative Biology 2023-08-15 Takeshi Ishida

We consider a reaction-diffusion system with discontinuous reaction terms modeled by non-ideal relays. The system is motivated by an epigenetic population model of evolution of two-phenotype bacteria which switch phenotype in response to…

Analysis of PDEs · Mathematics 2014-11-04 Pavel Gurevich , Dmitrii Rachinskii

Accurate and robust spatial orders are ubiquitous in living systems. In 1952, Alan Turing proposed an elegant mechanism for pattern formation based on spontaneous breaking of the spatial translational symmetry in the underlying…

Statistical Mechanics · Physics 2022-06-07 Dongliang Zhang , Chenghao Zhang , Qi Ouyang , Yuhai Tu

Pattern formation analysis of eco-epidemiological models with cannibalism and disease has been less explored in the literature. Therefore, motivated by this, we have proposed a diffusive eco-epidemiological model and performed pattern…

Analysis of PDEs · Mathematics 2021-03-09 Nitu Kumari , Vikas Kumar , Ravi P. Agarwal

We derive a necessary and sufficient condition for Turing instabilities to occur in two-component systems of reaction-diffusion equations with Neumann boundary conditions. We apply this condition to reaction-diffusion systems built from…

Mathematical Physics · Physics 2007-05-23 Rui Dilao