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We study homomorphism polynomials, which are polynomials that enumerate all homomorphisms from a pattern graph $H$ to $n$-vertex graphs. These polynomials have received a lot of attention recently for their crucial role in several new…

Computational Complexity · Computer Science 2020-11-17 Balagopal Komarath , Anurag Pandey , C. S. Rahul

A graph is an opposition graph, respectively, a coalition graph, if it admits an acyclic orientation which puts the two end-edges of every chordless 4-vertex path in opposition, respectively, in the same direction. Opposition and coalition…

Discrete Mathematics · Computer Science 2015-07-03 Van Bang Le , Thomas Podelleck

Threshold graphs are recursive deterministic network models that have been proposed for describing certain economic and social interactions. One drawback of this graph family is that it has limited generative attachment rules. To mitigate…

Social and Information Networks · Computer Science 2018-05-24 Vida Ravanmehr , Gregory J. Puleo , Sadegh Bolouki , Olgica Milenkovic

An undirected graph G is called a VPT graph if it is the vertex intersection graph of a family of paths in a tree. The class of graphs which admit a VPT representation in a host tree with maximum degree at most h is denoted by [h,2,1]. The…

Combinatorics · Mathematics 2013-07-09 Liliana Alcón , Marisa Gutierrez , María Pía Mazzoleni

Deciding whether a collection of unrooted trees is compatible is a fundamental problem in phylogenetics. Two different graph-theoretic characterizations of tree compatibility have recently been proposed. In one of these, tree compatibility…

Discrete Mathematics · Computer Science 2012-10-16 Sudheer Vakati , David Fernández-Baca

Analysing and explaining relationships between entities in a graph is a fundamental problem associated with many practical applications. For example, a graph of biological pathways can be used for discovering a previously unknown…

Social and Information Networks · Computer Science 2018-09-21 Raoul Biagioni , Pierre-Yves Vandenbussche , Vit Novacek

The directions of an infinite graph $G$ are a tangle-like description of its ends: they are choice functions that choose compatibly for all finite vertex sets $X\subseteq V(G)$ a component of $G-X$. Although every direction is induced by a…

Combinatorics · Mathematics 2021-01-19 Jan Kurkofka , Ruben Melcher

Let $P$ be a set of $n \geq 5$ points in convex position in the plane. The path graph $G(P)$ of $P$ is an abstract graph whose vertices are non-crossing spanning paths of $P$, such that two paths are adjacent if one can be obtained from the…

Combinatorics · Mathematics 2018-01-03 Chaya Keller , Yael Stein

In previous work, we defined the intersection graph of a chord diagram associated with a string link (as in the theory of finite type invariants). In this paper, we look at the case when this graph is a tree, and we show that in many cases…

Geometric Topology · Mathematics 2009-01-10 Blake Mellor

Nancy G. Kinnersley and Michael A. Langston has determined the excluded minors for the class of graphs with path-width at most two by computer. Their list consisted of 110 graphs. Such a long list is difficult to handle and gives no insight…

Combinatorics · Mathematics 2009-10-27 János Barát , Péter Hajnal , Yixun Lin , Aifeng Yang

Binary relations are one of the standard ways to encode, characterise and reason about graphs. Relation algebras provide equational axioms for a large fragment of the calculus of binary relations. Although relations are standard tools in…

Logic in Computer Science · Computer Science 2018-12-18 Rudolf Berghammer , Hitoshi Furusawa , Walter Guttmann , Peter Höfner

Entanglement is a complexity measure of directed graphs that origins in fixed point theory. This measure has shown its use in designing efficient algorithms to verify logical properties of transition systems. We are interested in the…

Logic in Computer Science · Computer Science 2009-04-09 Walid Belkhir , Luigi Santocanale

The paper considers the behaviour of the number of paths of length $N$ on graphs with two heavy roots. Such vertices can be entropic traps. Numerical analysis is carried out for graphs with different degrees of root vertices. In the…

Statistical Mechanics · Physics 2023-02-14 Z. D. Matyushina

A graph $G$ is said to be the intersection of graphs $G_1,G_2,\ldots,G_k$ if $V(G)=V(G_1)=V(G_2)=\cdots=V(G_k)$ and $E(G)=E(G_1)\cap E(G_2)\cap\cdots\cap E(G_k)$. For a graph $G$, $\mathrm{dim}_{COG}(G)$ (resp. $\mathrm{dim}_{TH}(G)$)…

Discrete Mathematics · Computer Science 2020-01-06 Daphna Chacko , Mathew C. Francis

An (h,s,t)-representation of a graph G consists of a collection of subtrees of a tree T, where each subtree corresponds to a vertex of G such that (i) the maximum degree of T is at most h, (ii) every subtree has maximum degree at mots s,…

Combinatorics · Mathematics 2011-12-15 Liliana Alcón , Marisa Gutierrez , María Pía Mazzoleni

Multipath cohomology is a cohomology theory for directed graphs, which is defined using the path poset. The aim of this paper is to investigate combinatorial properties of path posets, and to provide computational tools for multipath…

Combinatorics · Mathematics 2023-08-17 Luigi Caputi , Carlo Collari , Sabino Di Trani

A graph is circle if its vertices are in correspondence with a family of chords in a circle in such a way that every two distinct vertices are adjacent if and only if the corresponding chords have nonempty intersection. Even though there…

Discrete Mathematics · Computer Science 2023-04-04 Flavia Bonomo-Braberman , Guillermo A. Durán , Nina Pardal , Martín D. Safe

Directed graphs can be partitioned in so-called passages. A passage P is a set of edges such that any two edges sharing the same initial vertex or sharing the same terminal vertex are both inside $P$ or are both outside of P. Passages were…

Discrete Mathematics · Computer Science 2013-04-04 Wil van der Aalst

A consistent path system in a graph $G$ is an intersection-closed collection of paths, with exactly one path between any two vertices in $G$. We call $G$ metrizable if every consistent path system in it is the system of geodesic paths…

Combinatorics · Mathematics 2023-11-17 Maria Chudnovsky , Daniel Cizma , Nati Linial

We study the complexity of the Graph Isomorphism problem on graph classes that are characterized by a finite number of forbidden induced subgraphs, focusing mostly on the case of two forbidden subgraphs. We show hardness results and develop…

Data Structures and Algorithms · Computer Science 2015-03-20 Stefan Kratsch , Pascal Schweitzer