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We study a class of finite state machines, called \defi{$w$-matching machines}, which yield to simulate the behavior of pattern matching algorithms while searching for a pattern $w$. They can be used to compute the asymptotic speed, i.e.…

Computational Complexity · Computer Science 2016-05-03 Gilles Didier

A prefix normal word is a binary word with the property that no substring has more 1s than the prefix of the same length. This class of words is important in the context of binary jumbled pattern matching. In this paper we present an…

Data Structures and Algorithms · Computer Science 2014-06-23 Péter Burcsi , Gabriele Fici , Zsuzsanna Lipták , Frank Ruskey , Joe Sawada

We present a strongly exponential lower bound that applies both to the subset synchronization threshold for binary deterministic automata and to the careful synchronization threshold for binary partial automata. In the later form, the…

Formal Languages and Automata Theory · Computer Science 2016-02-16 Vojtěch Vorel

In [1], we introduced the weakly synchronizing languages for probabilistic automata. In this report, we show that the emptiness problem of weakly synchronizing languages for probabilistic automata is undecidable. This implies that the…

Formal Languages and Automata Theory · Computer Science 2012-06-06 Laurent Doyen , Thierry Massart , Mahsa Shirmohammadi

Described are two algorithms to find long approximate palindromes in a string, for example a DNA sequence. A simple algorithm requires O(n)-space and almost always runs in $O(k.n)$-time where n is the length of the string and k is the…

Data Structures and Algorithms · Computer Science 2007-05-23 L. Allison

We generalize Karp-Rabin string matching to handle multiple patterns in $\mathcal{O}(n \log n + m)$ time and $\mathcal{O}(s)$ space, where $n$ is the length of the text and $m$ is the total length of the $s$ patterns, returning correct…

Data Structures and Algorithms · Computer Science 2015-09-11 Johannes Fischer , Travis Gagie , Paweł Gawrychowski , Tomasz Kociumaka

This paper studies the complexity of operations on finite automata and the complexity of their decision problems when the alphabet is unary. Let $n$ denote the maximum of the number of states of the input finite automata considered in the…

Formal Languages and Automata Theory · Computer Science 2024-12-16 Wojciech Czerwiński , Maciej Dębski , Tomasz Gogasz , Gordon Hoi , Sanjay Jain , Michał Skrzypczak , Frank Stephan , Christopher Tan

For $0<\delta <1$ a $\delta$-subrepetition in a word is a factor which exponent is less than~2 but is not less than $1+\delta$ (the exponent of the factor is the ratio of the factor length to its minimal period). The $\delta$-subrepetition…

Data Structures and Algorithms · Computer Science 2022-08-10 Roman Kolpakov

We prove that, for any arbitrary finite alphabet and for the uniform distribution over deterministic and accessible automata with n states, the average complexity of Moore's state minimization algorithm is in O(n log n). Moreover this bound…

Data Structures and Algorithms · Computer Science 2009-02-09 Frédérique Bassino , Julien David , Cyril Nicaud

In this paper we present a really simple linear-time algorithm constructing a context-free grammar of size O(g log (N/g)) for the input string, where N is the size of the input string and g the size of the optimal grammar generating this…

Data Structures and Algorithms · Computer Science 2014-03-19 Artur Jeż

We give an $\tilde O(n^2)$ time algorithm for computing the exact Dynamic Time Warping distance between two strings whose run-length encoding is of size at most $n$. This matches (up to log factors) the known (conditional) lower bound, and…

Data Structures and Algorithms · Computer Science 2023-02-14 Itai Boneh , Shay Golan , Shay Mozes , Oren Weimann

The asynchronous dynamics associated with a Boolean network $f : \{0,1\}^n \to \{0,1\}^n$ is a finite deterministic automaton considered in many applications. The set of states is $\{0,1\}^n$, the alphabet is $[n]$, and the action of letter…

Combinatorics · Mathematics 2018-04-06 Maximilien Gadouleau , Adrien Richard

The palindromic tree (a.k.a. eertree) for a string $S$ of length $n$ is a tree-like data structure that represents the set of all distinct palindromic substrings of $S$, using $O(n)$ space [Rubinchik and Shur, 2018]. It is known that, when…

Data Structures and Algorithms · Computer Science 2020-11-12 Takuya Mieno , Kiichi Watanabe , Yuto Nakashima , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

This paper considers the \textit{minimum spanning tree (MST)} problem in the Congested Clique model and presents an algorithm that runs in $O(\log \log \log n)$ rounds, with high probability. Prior to this, the fastest MST algorithm in this…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-12-09 Sriram V. Pemmaraju , Vivek B. Sardeshmukh

Previous work on Dynamic Complexity has established that there exist dynamic constant-time parallel algorithms for regular tree languages and context-free languages under label or symbol changes. However, these algorithms were not developed…

Data Structures and Algorithms · Computer Science 2023-07-20 Jonas Schmidt , Thomas Schwentick , Jennifer Todtenhoefer

Motivated by the imminent growth of massive, highly redundant genomic databases, we study the problem of compressing a string database while simultaneously supporting fast random access, substring extraction and pattern matching to the…

Data Structures and Algorithms · Computer Science 2012-11-01 Travis Gagie , Paweł Gawrychowski , Christopher Hoobin , Simon J. Puglisi

For a finite state automaton, a synchronizing sequence is an input sequence that takes all the states to the same state. Checking the existence of a synchronizing sequence and finding a synchronizing sequence, if one exists, can be…

Artificial Intelligence · Computer Science 2013-12-24 Canan Güniçen , Esra Erdem , Hüsnü Yenigün

This article focuses on subset reachability in synchronizing automata. First, we provide families of synchronizing automata with subsets which cannot be reached with short words. These families do not fulfil Don's Conjecture about subset…

Formal Languages and Automata Theory · Computer Science 2018-05-08 François Gonze , Raphaël M. Jungers

We prove the exact asymptotic $1-\left({\frac{2\pi}{3}-\frac{827}{288\pi}}+o(1)\right)/{\sqrt{n}}$ for the probability that the underlying graph of a random mapping of $n$ elements possesses a unique highest tree. The property of having a…

Probability · Mathematics 2016-06-02 Mikhail V. Berlinkov

It is known, that an $\epsilon$-machine is either exactly or asymptotically synchronizing. In the exact case, the observer can infer the current machine state after observing $L$ generated symbols with probability $1-a^L$ where $0 \leq a<1$…

Information Theory · Computer Science 2014-09-24 Mikhail V. Berlinkov