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Progress in science is deeply bound to the effective use of high-performance computing infrastructures and to the efficient extraction of knowledge from vast amounts of data. Such data comes from different sources that follow a cycle…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-15 Rosa M Badia , Jorge Ejarque , Francesc Lordan , Daniele Lezzi , Javier Conejero , Javier Álvarez Cid-Fuentes , Yolanda Becerra , Anna Queralt

Accessing research data at any time is what FAIR (Findable Accessible Interoperable Reusable) data sharing aims to achieve at scale. Yet, we argue that it is not sustainable to keep accumulating and maintaining all datasets for rapid…

Databases · Computer Science 2023-01-04 Cyril Pernet , Claus Svarer , Ross Blair , John D. Van Horn , Russell A. Poldrack

The connect-fill-run workflow paradigm, widely adopted in mature software engineering, accelerates collaborative development. However, computational chemistry, computational materials science, and computational biology face persistent…

Chemical Physics · Physics 2025-08-12 Jianan Wang , Wenbo Guo , Xin Yue , Minjie Xu , Yueqiang Zheng , Jingxiang Dong , Jiarui Hu , Jian Xia , Chuixiong Wu

We are in the era of the Big Data. In Astronomy and Astrophysics, the massive amounts of data generated are, as of today, in the Peta-scale if not already in the Exa-scale. In the near future, we will see the data collected size and…

Instrumentation and Methods for Astrophysics · Physics 2023-02-23 S. Bertocco

We highlight here several solutions developed to make high-level Cherenkov data FAIR: Findable, Accessible, Interoperable and Reusable. The first three FAIR principles may be ensured by properly indexing the data and using community…

Information Theory · Computer Science 2022-01-11 Mathieu Servillat , Catherine Boisson , Matthias Fuessling , Bruno Khelifi

In the rapidly evolving field of bioimaging, the integration and orchestration of Findable, Accessible, Interoperable, and Reusable (FAIR) image analysis workflows remains a challenge. We introduce BIOMERO, a bridge connecting OMERO, a…

Software Engineering · Computer Science 2024-07-26 Torec T. Luik , Rodrigo Rosas-Bertolini , Eric A. J. Reits , Ron A. Hoebe , Przemek M. Krawczyk

$\textit{A priori}$ prediction of phase stability of materials is a challenging practice, requiring knowledge of all energetically-competing structures at formation conditions. Large materials repositories $\unicode{x2014}$ housing…

The availability and easy access of large scale experimental and computational materials data have enabled the emergence of accelerated development of algorithms and models for materials property prediction, structure prediction, and…

In recent years, discussions about fairness in machine learning, AI ethics and algorithm audits have increased. Many entities have developed framework guidance to establish a baseline rubric for fairness and accountability. However, in…

Machine Learning · Computer Science 2022-06-23 Cherie M Poland

Mechanical and thermodynamic properties, including the influence of crystal defects, are critical for evaluating materials in engineering applications. Molecular dynamics simulations provide valuable insight into these mechanisms at the…

Today's online platforms heavily lean on algorithmic recommendations for bolstering user engagement and driving revenue. However, these recommendations can impact multiple stakeholders simultaneously -- the platform, items (sellers), and…

Information Retrieval · Computer Science 2024-05-28 Qinyi Chen , Jason Cheuk Nam Liang , Negin Golrezaei , Djallel Bouneffouf

The concept of FAIR Digital Objects represents a foundational step towards realizing machine-actionable, interoperable data infrastructures across scientific and industrial domains. As digital spaces become increasingly heterogeneous,…

The rapid growth of data in the recent years has led to the development of complex learning algorithms that are often used to make decisions in real world. While the positive impact of the algorithms has been tremendous, there is a need to…

Machine Learning · Computer Science 2022-01-03 Ankit Kulshrestha , Ilya Safro

In modern information retrieval (IR). achieving more than just accuracy is essential to sustaining a healthy ecosystem, especially when addressing fairness and diversity considerations. To meet these needs, various datasets, algorithms, and…

Information Retrieval · Computer Science 2025-02-18 Chen Xu , Zhirui Deng , Clara Rus , Xiaopeng Ye , Yuanna Liu , Jun Xu , Zhicheng Dou , Ji-Rong Wen , Maarten de Rijke

To retrieve and compare scientific data of simulations and experiments in materials science, data needs to be easily accessible and machine readable to qualify and quantify various materials science phenomena. The recent progress in open…

Materials Science · Physics 2025-03-25 Balduin Katzer , Steffen Klinder , Katrin Schulz

Many research groups aspire to make data and code FAIR and reproducible, yet struggle because the data and code life cycles are disconnected, executable environments are often missing from published work, and technical skill requirements…

The Workflows Community Summit gathered 111 participants from 18 countries to discuss emerging trends and challenges in scientific workflows, focusing on six key areas: time-sensitive workflows, AI-HPC convergence, multi-facility workflows,…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-22 Rafael Ferreira da Silva , Deborah Bard , Kyle Chard , Shaun de Witt , Ian T. Foster , Tom Gibbs , Carole Goble , William Godoy , Johan Gustafsson , Utz-Uwe Haus , Stephen Hudson , Shantenu Jha , Laila Los , Drew Paine , Frédéric Suter , Logan Ward , Sean Wilkinson , Marcos Amaris , Yadu Babuji , Jonathan Bader , Riccardo Balin , Daniel Balouek , Sarah Beecroft , Khalid Belhajjame , Rajat Bhattarai , Wes Brewer , Paul Brunk , Silvina Caino-Lores , Henri Casanova , Daniela Cassol , Jared Coleman , Taina Coleman , Iacopo Colonnelli , Anderson Andrei Da Silva , Daniel de Oliveira , Pascal Elahi , Nour Elfaramawy , Wael Elwasif , Brian Etz , Thomas Fahringer , Wesley Ferreira , Rosa Filgueira , Jacob Fosso Tande , Luiz Gadelha , Andy Gallo , Daniel Garijo , Yiannis Georgiou , Philipp Gritsch , Patricia Grubel , Amal Gueroudji , Quentin Guilloteau , Carlo Hamalainen , Rolando Hong Enriquez , Lauren Huet , Kevin Hunter Kesling , Paula Iborra , Shiva Jahangiri , Jan Janssen , Joe Jordan , Sehrish Kanwal , Liliane Kunstmann , Fabian Lehmann , Ulf Leser , Chen Li , Peini Liu , Jakob Luettgau , Richard Lupat , Jose M. Fernandez , Ketan Maheshwari , Tanu Malik , Jack Marquez , Motohiko Matsuda , Doriana Medic , Somayeh Mohammadi , Alberto Mulone , John-Luke Navarro , Kin Wai Ng , Klaus Noelp , Bruno P. Kinoshita , Ryan Prout , Michael R. Crusoe , Sashko Ristov , Stefan Robila , Daniel Rosendo , Billy Rowell , Jedrzej Rybicki , Hector Sanchez , Nishant Saurabh , Sumit Kumar Saurav , Tom Scogland , Dinindu Senanayake , Woong Shin , Raul Sirvent , Tyler Skluzacek , Barry Sly-Delgado , Stian Soiland-Reyes , Abel Souza , Renan Souza , Domenico Talia , Nathan Tallent , Lauritz Thamsen , Mikhail Titov , Benjamin Tovar , Karan Vahi , Eric Vardar-Irrgang , Edite Vartina , Yuandou Wang , Merridee Wouters , Qi Yu , Ziad Al Bkhetan , Mahnoor Zulfiqar

Reinforcement learning has emerged as a promising paradigm for aligning diffusion and flow-matching models with human preferences, yet practitioners face fragmented codebases, model-specific implementations, and engineering complexity. We…

Machine Learning · Computer Science 2026-03-17 Bowen Ping , Chengyou Jia , Minnan Luo , Hangwei Qian , Ivor Tsang

Making energy consumption data accessible to software developers is an essential step towards energy efficient software engineering. The presence of various different, bespoke and incompatible, methods of instrumentation to obtain energy…

Software Engineering · Computer Science 2021-01-14 Hayden Field , Glen Anderson , Kerstin Eder

Scientific workflows are becoming increasingly popular for compute-intensive and data-intensive scientific applications. The vision and promise of scientific workflows includes rapid, easy workflow design, reuse, scalable execution, and…

Databases · Computer Science 2013-11-26 Víctor Cuevas-Vicenttín , Saumen Dey , Sven Köhler , Sean Riddle , Bertram Ludäscher
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