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Recent work in behavioral testing for natural language processing (NLP) models, such as Checklist, is inspired by related paradigms in software engineering testing. They allow evaluation of general linguistic capabilities and domain…

Computation and Language · Computer Science 2024-08-09 Ying Li , Rahul Singh , Tarun Joshi , Agus Sudjianto

Recently, pre-trained language models like BERT have shown promising performance on multiple natural language processing tasks. However, the application of these models has been limited due to their huge size. To reduce its size, a popular…

Computation and Language · Computer Science 2020-10-15 Zihan Zhao , Yuncong Liu , Lu Chen , Qi Liu , Rao Ma , Kai Yu

Pre-trained language models such as BERT have shown remarkable effectiveness in various natural language processing tasks. However, these models usually contain millions of parameters, which prevents them from practical deployment on…

Computation and Language · Computer Science 2022-01-03 Changsheng Zhao , Ting Hua , Yilin Shen , Qian Lou , Hongxia Jin

Clustering is a difficult and widely-studied data mining task, with many varieties of clustering algorithms proposed in the literature. Nearly all algorithms use a similarity measure such as a distance metric (e.g. Euclidean distance) to…

Neural and Evolutionary Computing · Computer Science 2019-10-24 Andrew Lensen , Bing Xue , Mengjie Zhang

In natural language processing, a lot of the tasks are successfully solved with recurrent neural networks, but such models have a huge number of parameters. The majority of these parameters are often concentrated in the embedding layer,…

Computation and Language · Computer Science 2018-12-13 Nadezhda Chirkova , Ekaterina Lobacheva , Dmitry Vetrov

The use of natural language processing (NLP) techniques in engineering education can provide valuable insights into the underlying processes involved in generating text. While accessing these insights can be labor-intensive if done…

Human-Computer Interaction · Computer Science 2023-05-30 Andrew Katz , Umair Shakir , Ben Chambers

Clustering a lexicon of words is a well-studied problem in natural language processing (NLP). Word clusters are used to deal with sparse data in statistical language processing, as well as features for solving various NLP tasks (text…

Computation and Language · Computer Science 2018-08-17 Effi Levi , Saggy Herman , Ari Rappoport

Objectives: The vast and complex nature of human genomic sequencing data presents challenges for effective analysis. This review aims to investigate the application of Natural Language Processing (NLP) techniques, particularly Large…

Genomics · Quantitative Biology 2025-02-28 Shuyan Cheng , Yishu Wei , Yiliang Zhou , Zihan Xu , Drew N Wright , Jinze Liu , Yifan Peng

In most natural language inference problems, sentence representation is needed for semantic retrieval tasks. In recent years, pre-trained large language models have been quite effective for computing such representations. These models…

Computation and Language · Computer Science 2023-04-26 Domagoj Ševerdija , Tomislav Prusina , Antonio Jovanović , Luka Borozan , Jurica Maltar , Domagoj Matijević

Protein representation learning is a challenging task that aims to capture the structure and function of proteins from their amino acid sequences. Previous methods largely ignored the fact that not all amino acids are equally important for…

Machine Learning · Computer Science 2024-04-02 Ruijie Quan , Wenguan Wang , Fan Ma , Hehe Fan , Yi Yang

NLP pipelines with limited or no labeled data, rely on unsupervised methods for document processing. Unsupervised approaches typically depend on clustering of terms or documents. In this paper, we introduce a novel clustering algorithm,…

Information Retrieval · Computer Science 2023-04-13 Rajesh N Rao , Manojit Chakraborty

The rapid advance of DNA sequencing technologies has yielded databases of thousands of genomes. To search and index these databases effectively, it is important that we take advantage of the similarity between those genomes. Several authors…

Data Structures and Algorithms · Computer Science 2014-12-05 Travis Gagie , Simon J. Puglisi

$n$-gram profiles have been successfully and widely used to analyse long sequences of potentially differing lengths for clustering or classification. Mainly, machine learning algorithms have been used for this purpose but, despite their…

Methodology · Statistics 2024-09-04 José A. Perusquía , Jim E. Griffin , Cristiano Villa

Text clustering is an important method for organising the increasing volume of digital content, aiding in the structuring and discovery of hidden patterns in uncategorised data. The effectiveness of text clustering largely depends on the…

Computation and Language · Computer Science 2024-12-06 Alina Petukhova , João P. Matos-Carvalho , Nuno Fachada

Microarray data analysis is one of the major area of research in the field computational biology. Numerous techniques like clustering, biclustering are often applied to microarray data to extract meaningful outcomes which play key roles in…

Neural and Evolutionary Computing · Computer Science 2019-09-04 Shubhankar Mohapatra , Moumita Sarkar , Anjali Mohapatra , Bhawani Sankar Biswal

Clustering is a well-known unsupervised machine learning approach capable of automatically grouping discrete sets of instances with similar characteristics. Constrained clustering is a semi-supervised extension to this process that can be…

Machine Learning · Computer Science 2023-03-02 Germán González-Almagro , Daniel Peralta , Eli De Poorter , José-Ramón Cano , Salvador García

Natural Language Processing (NLP) has transformed various fields beyond linguistics by applying techniques originally developed for human language to the analysis of biological sequences. This review explores the application of NLP methods…

Computation and Language · Computer Science 2025-06-04 Ella Rannon , David Burstein

We compare the performance of different clustering algorithms applied to the task of unsupervised text categorization. We consider agglomerative clustering algorithms, principal direction divisive partitioning and (for the first time)…

Disordered Systems and Neural Networks · Physics 2007-05-23 D. Volk , M. G. Stepanov

Speaker clustering is the task of differentiating speakers in a recording. In a way, the aim is to answer "who spoke when" in audio recordings. A common method used in industry is feature extraction directly from the recording thanks to…

Sound · Computer Science 2018-03-23 Maxime Jumelle , Taqiyeddine Sakmeche

The feature matching is a basic step in matching different datasets. This article proposes shows a new hybrid model of a pretrained Natural Language Processing (NLP) based model called BERT used in parallel with a statistical model based on…

Databases · Computer Science 2023-03-24 Muhammad Danial Khilji