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Living neural networks emerge through a process of growth and self-organization that begins with a single cell and results in a brain, an organized and functional computational device. Artificial neural networks, however, rely on…

Neural and Evolutionary Computing · Computer Science 2019-06-05 Guruprasad Raghavan , Matt Thomson

Designing metal-organic frameworks (MOFs) with novel chemistries is a longstanding challenge due to their large combinatorial space and complex 3D arrangements of the building blocks. While recent deep generative models have enabled…

Biomolecules · Quantitative Biology 2026-02-05 Nayoung Kim , Seongsu Kim , Sungsoo Ahn

Evolution and development operate at different timescales; generations for the one, a lifetime for the other. These two processes, the basis of much of life on earth, interact in many non-trivial ways, but their temporal hierarchy --…

Neural and Evolutionary Computing · Computer Science 2022-01-20 Fabien C. Y. Benureau , Jun Tani

Understanding quantum phases and phase transitions in the presence of symmetries is a central objective of quantum many-body physics. A powerful modern paradigm for investigating this problem is topological holography, which relates…

Strongly Correlated Electrons · Physics 2026-05-01 Shang Liu

The algorithmic self-assembly of shapes has been considered in several models of self-assembly. For the problem of \emph{shape construction}, we consider an extended version of the Two-Handed Tile Assembly Model (2HAM), which contains…

Computational Geometry · Computer Science 2016-08-18 Austin Luchsinger , Robert Schweller , Tim Wylie

We formally introduce a systematic (de/re)-composition approach, based on the algebraic formalism of "Multi-Dimensional Homomorphisms (MDHs)". Our approach is designed as general enough to be applicable to a wide range of data-parallel…

Programming Languages · Computer Science 2025-07-01 Ari Rasch

Net-trees are a general purpose data structure for metric data that have been used to solve a wide range of algorithmic problems. We give a simple randomized algorithm to construct net-trees on doubling metrics using $O(n\log n)$ time in…

Computational Geometry · Computer Science 2018-09-06 Mahmoodreza Jahanseir , Donald R. Sheehy

Object completion networks typically produce static Signed Distance Fields (SDFs) that faithfully reconstruct geometry but cannot be rescaled or deformed without introducing structural distortions. This limitation restricts their use in…

Computer Vision and Pattern Recognition · Computer Science 2026-02-16 Jelle Vermandere , Maarten Bassier , Maarten Vergauwen

We study the well-known problem of combinatorial classification of fullerenes. By a (mathematical) fullerene we mean a convex simple three dimensional polytope with all facets pentagons and hexagons. We analyse approaches of construction of…

Combinatorics · Mathematics 2016-11-17 Victor M. Buchstaber , Nikolay Erokhovets

Complex networks have become increasingly popular for modeling various real-world phenomena. Realistic generative network models are important in this context as they avoid privacy concerns of real data and simplify complex network research…

Data Structures and Algorithms · Computer Science 2015-04-24 Moritz von Looz , Christian L. Staudt , Henning Meyerhenke , Roman Prutkin

This paper investigates the parallel complexity of several non-equilibrium growth models. Invasion percolation, Eden growth, ballistic deposition and solid-on-solid growth are all seemingly highly sequential processes that yield…

Condensed Matter · Physics 2009-10-22 J. Machta , R. Greenlaw

The innumerable shapes of plant leaves present a challenge to the explanatory power of biophysical theory. A model is needed that can produce these shapes with a small set of parameters. This paper presents a simple model of leaf shape…

Tissues and Organs · Quantitative Biology 2010-04-27 David A. Young

This study innovates geometric morphometrics by incorporating functional data analysis, the square-root velocity function (SRVF), and arc-length parameterisation for 3D morphometric data, leading to the development of seven new pipelines in…

Given a two-level regular fractional factorial design of resolution IV, the method of doubling produces another design of resolution IV which doubles both the run size and the number of factors of the initial design. On the other hand, the…

Statistics Theory · Mathematics 2007-06-13 Hegang H. Chen , Ching-Shui Cheng

In the distributed setting, the only existing constructions of \textit{sparse skeletons}, (i.e., subgraphs with $O(n)$ edges) either use randomization or large messages, or require $\Omega(D)$ time, where $D$ is the hop-diameter of the…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-07-26 Michael Elkin , Shaked Matar

Successful training of convolutional neural networks is often associated with sufficiently deep architectures composed of high amounts of features. These networks typically rely on a variety of regularization and pruning techniques to…

Computer Vision and Pattern Recognition · Computer Science 2017-10-23 Martin Mundt , Tobias Weis , Kishore Konda , Visvanathan Ramesh

Although various structural optimization techniques have a sound mathematical basis, the practical constructability of optimal designs poses a great challenge in the manufacturing stage. Currently, there is only a limited number of unified…

Numerical Analysis · Mathematics 2024-07-19 Lowhikan Sivanantha Sarma , Chinthaka Mallikarachchi , Sumudu Herath

DBSCAN is an algorithm that performs clustering in the presence of noise. In this paper, we provide two constructions that allow DBSCAN to be implemented neuromorphically, using spiking neural networks. The first construction is termed…

Neural and Evolutionary Computing · Computer Science 2024-09-24 Charles P. Rizzo , James S. Plank

Advances in Geometric Semantic Genetic Programming (GSGP) have shown that this variant of Genetic Programming (GP) reaches better results than its predecessor for supervised machine learning problems, particularly in the task of symbolic…

Neural and Evolutionary Computing · Computer Science 2018-04-19 Joao Francisco B. S. Martins , Luiz Otavio V. B. Oliveira , Luis F. Miranda , Felipe Casadei , Gisele L. Pappa

Given an $\mathbb{N}$-weighted tree automaton, we give a decision procedure for exponential vs polynomial growth (with respect to the input size) in quadratic time, and an algorithm that computes the exact polynomial degree of growth in…

Formal Languages and Automata Theory · Computer Science 2026-01-07 Paul Gallot , Nathan Lhote , Lê Thành Dũng Nguyên