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Grafting linkers with open ends of complementary single-stranded DNA makes a flexible tool to tune interactions between colloids,which facilitates the design of complex self-assembly structures. Recently, it has been proposed to coat…

Soft Condensed Matter · Physics 2018-01-31 Hao Hu , Pablo Sampedro Ruiz , Ran Ni

We derive a general lower bound on distributions of entropy production in interacting active matter systems. The bound is tight in the limit that interparticle correlations are small and short-ranged, which we explore in four canonical…

Statistical Mechanics · Physics 2021-02-03 Trevor GrandPre , Katherine Klymko , Kranthi K. Mandadapu , David T. Limmer

Far-from-equilibrium thermodynamics underpins the emergence of life, but how has been a long-outstanding puzzle. Best candidate theories based on the maximum entropy production principle could not be unequivocally proven, in part due to…

Quantitative Methods · Quantitative Biology 2017-10-10 Robert G. Endres

I consider coherent vibrational states of the quantum plasmas formed by the conduction electrons and protons inside a metal hydride. Such states can interact coherently through weak interaction to produce neutrons at very low energy. The…

General Physics · Physics 2022-09-14 Luca Gamberale

In living cells, cycles of formation and dissolution of liquid droplets can mediate biological functions such as DNA repair. However, the minimal physicochemical prerequisite for such droplet oscillations remains elusive. Here, we present a…

Soft Condensed Matter · Physics 2025-03-17 Ivar S. Haugerud , Hidde D. Vuijk , Job Boekhoven , Christoph A. Weber

The rate of entropy production by a stochastic process quantifies how far it is from thermodynamic equilibrium. Equivalently, entropy production captures the degree to which detailed balance and time-reversal symmetry are broken. Despite…

Statistical Mechanics · Physics 2020-12-02 Luca Cocconi , Rosalba Garcia-Millan , Zigan Zhen , Bianca Buturca , Gunnar Pruessner

Formation of the nonequilibrium subsystem in dynamical processes during defect generation is simulated by means of molecular dynamics. A particular process of dissipation of the low-frequency acoustic emission into high-frequency…

Computational Physics · Physics 2009-12-11 Leonid S. Metlov

A colloidal particle immersed in a bath of bacteria is a typical example of a passive particle in an active bath. To model this, we take an overdamped harmonically trapped particle subjected to a thermal and a non-equilibrium noise arising…

Statistical Mechanics · Physics 2018-08-02 Subhasish Chaki , Rajarshi Chakrabarti

The probability distribution of the total entropy production in the non-equilibrium steady state follows a symmetry relation called the fluctuation theorem. When a certain part of the system is masked or hidden, it is difficult to infer the…

Statistical Mechanics · Physics 2020-04-29 Deepak Gupta , Sanjib Sabhapandit

The out-of-equilibrium character of active systems is often twofold, arising from both the activity itself and from non-reciprocal couplings between constituents. A well-established measure to quantify the system's distance from equilibrium…

Statistical Mechanics · Physics 2026-02-13 Kim L. Kreienkamp , Sabine H. L. Klapp

A run-and-tumble particle in a one dimensional box (infinite potential well) is studied. The steady state is analytically solved and analyzed, revealing the emergent length scale of the boundary layer where particles accumulate near the…

Statistical Mechanics · Physics 2020-10-07 Nitzan Razin

We investigate collective phenomena with rotationally driven spinners of concave shape. Each spinner experiences a constant internal torque in either a clockwise or counterclockwise direction. Although the spinners are modeled as hard,…

Soft Condensed Matter · Physics 2014-03-10 Nguyen H. P. Nguyen , Daphne Klotsa , Michael Engel , Sharon C. Glotzer

We study the entropy production of a system with a finite number of states connected by random transition rates. The stationary entropy production, driven out of equilibrium both by asymmetric transition rates and by an external probability…

Statistical Mechanics · Physics 2017-12-13 Daniel M. Busiello , Jorge Hidalgo , Amos Maritan

Entropy drives the phase behavior of colloids ranging from dense suspensions of hard spheres or rods to dilute suspensions of hard spheres and depletants. Entropic ordering of anisotropic shapes into complex crystals, liquid crystals, and…

Soft Condensed Matter · Physics 2014-11-26 Greg van Anders , Daphne Klotsa , N. Khalid Ahmed , Michael Engel , Sharon C. Glotzer

Networks of particles connected by springs model many condensed-matter systems, from colloids interacting with a short-range potential, to complex fluids near jamming, to self-assembled lattices, to origami-inspired materials. Under small…

Statistical Mechanics · Physics 2017-03-01 Yoav Kallus , Miranda Holmes-Cerfon

The dynamical properties and mechanical functions of amorphous materials are governed by their microscopic structures, particularly the elasticity of the interaction networks, which is generally complicated by structural heterogeneity. This…

Statistical Mechanics · Physics 2018-04-11 Le Yan

Entropy functionals are computed for non-stationary distributions of particles of Lorentz gas and hard disks. The distributions consisting of beams of particles are found to have the largest amount of entropy and entropy increase. The…

Statistical Mechanics · Physics 2007-05-23 Maurice Courbage , Seyed Majid Saberi Fathi

We analyze generation of phonons in tunneling structures with two electron states coupled by electron-phonon interaction. The conditions of strong vibration excitations are determined and dependence of non-equilibrium phonon occupation…

Mesoscale and Nanoscale Physics · Physics 2007-05-23 P. I. Arseyev , N. S. Maslova

It is shown that two reacting cosmological fluids, each of them perfect on its own, which exchange energy and momentum without preserving particle numbers, give rise to an entropy producing `reactive' bulk stress of the system as a whole,…

Astrophysics · Physics 2015-06-24 Winfried Zimdahl

In dynamical systems composed of interacting parts, conditional exponents, conditional exponent entropies and cylindrical entropies are shown to be well defined ergodic invariants which characterize the dynamical selforganization and…

adap-org · Physics 2009-10-30 R. Vilela Mendes