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This paper presents an octree construction method, called Cornerstone, that facilitates global domain decomposition and interactions between particles in mesh-free numerical simulations. Our method is based on algorithms developed for 3D…

Instrumentation and Methods for Astrophysics · Physics 2023-07-14 Sebastian Keller , Aurélien Cavelan , Rubén Cabezon , Lucio Mayer , Florina M. Ciorba

Given a graph G, the {\em maximum internal spanning tree problem} (MIST for short) asks for computing a spanning tree T of G such that the number of internal vertices in T is maximized. MIST has possible applications in the design of…

Data Structures and Algorithms · Computer Science 2016-08-02 Zhi-Zhong Chen , Youta Harada , Lusheng Wang

This paper proposes a stable sparse rapidly-exploring random trees (SST) algorithm to solve the optimal motion planning problem for hybrid systems. At each iteration, the proposed algorithm, called HySST, selects a vertex with the lowest…

Robotics · Computer Science 2023-05-31 Nan Wang , Ricardo G. Sanfelice

Building a spanning tree, minimum spanning tree (MST), and BFS tree in a distributed network are fundamental problems which are still not fully understood in terms of time and communication cost. x The first work to succeed in computing a…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-07-30 Ali Mashreghi , Valerie King

Algorithms for dynamically maintaining minimum spanning trees (MSTs) have received much attention in both the parallel and sequential settings. While previous work has given optimal algorithms for dense graphs, all existing parallel…

Data Structures and Algorithms · Computer Science 2020-10-27 Daniel Anderson , Guy E. Blelloch , Kanat Tangwongsan

Gravitational $N$-body simulations calculate numerous interactions between particles. The tree algorithm reduces these calculations by constructing a hierarchical oct-tree structure and approximating gravitational forces on particles. Over…

Instrumentation and Methods for Astrophysics · Physics 2024-01-09 Tomoyuki Tokuue , Tomoaki Ishiyama

For a metric graph $G=(V,E)$ and $R\subset V$, the internal Steiner minimum tree problem asks for a minimum weight Steiner tree spanning $R$ such that every vertex in $R$ is not a leaf. This note shows a simple polynomial-time…

Data Structures and Algorithms · Computer Science 2013-07-18 Bang Ye Wu

The Euclidean Steiner tree problem asks to find a min-cost metric graph that connects a given set of \emph{terminal} points $X$ in $\mathbb{R}^d$, possibly using points not in $X$ which are called Steiner points. Even though near-linear…

Computational Geometry · Computer Science 2023-12-01 T-H. Hubert Chan , Gramoz Goranci , Shaofeng H. -C. Jiang , Bo Wang , Quan Xue

Processing graphs with temporal information (the temporal graphs) has become increasingly important in the real world. In this paper, we study efficient solutions to temporal graph applications using new algorithms for Incremental Minimum…

Data Structures and Algorithms · Computer Science 2025-05-13 Xiangyun Ding , Yan Gu , Yihan Sun

Given a graph $G = (V, E)$, we wish to compute a spanning tree whose maximum vertex degree, i.e. tree degree, is as small as possible. Computing the exact optimal solution is known to be NP-hard, since it generalizes the Hamiltonian path…

Data Structures and Algorithms · Computer Science 2020-06-02 Ran Duan , Haoqing He , Tianyi Zhang

A fundamental problem in wireless networks is the \emph{minimum spanning tree} (MST) problem: given a set $V$ of wireless nodes, compute a spanning tree $T$, so that the total cost of $T$ is minimized. In recent years, there has been a lot…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-06-07 Maleq Khan , V. S. Anil Kumar , Gopal Pandurangan , Guanhong Pei

We study the {\em min-cost chain-constrained spanning-tree} (abbreviated \mcst) problem: find a min-cost spanning tree in a graph subject to degree constraints on a nested family of node sets. We devise the {\em first} polytime algorithm…

Data Structures and Algorithms · Computer Science 2016-05-12 Andre Linhares , Chaitanya Swamy

We study the multi-level Steiner tree problem: a generalization of the Steiner tree problem in graphs where terminals $T$ require varying priority, level, or quality of service. In this problem, we seek to find a minimum cost tree…

Data Structures and Algorithms · Computer Science 2020-05-18 Reyan Ahmed , Faryad Darabi Sahneh , Keaton Hamm , Stephen Kobourov , Richard Spence

We propose a hybrid tree algorithm for reducing calculation and communication cost of collision-less N-body simulations. The concept of our algorithm is that we split interaction force into two parts: hard-force from neighbor particles and…

Instrumentation and Methods for Astrophysics · Physics 2014-06-25 Tsuyoshi Watanabe , Naohito Nakasato

In this paper we describe an algorithm that embeds a graph metric $(V,d_G)$ on an undirected weighted graph $G=(V,E)$ into a distribution of tree metrics $(T,D_T)$ such that for every pair $u,v\in V$, $d_G(u,v)\leq d_T(u,v)$ and…

Data Structures and Algorithms · Computer Science 2017-05-29 Guy E. Blelloch , Yan Gu , Yihan Sun

Given a graph $G = (V,E)$ and a subset $T \subseteq V$ of terminals, a \emph{Steiner tree} of $G$ is a tree that spans $T$. In the vertex-weighted Steiner tree (VST) problem, each vertex is assigned a non-negative weight, and the goal is to…

Data Structures and Algorithms · Computer Science 2019-05-07 Faryad Darabi Sahneh , Alon Efrat , Stephen Kobourov , Spencer Krieger , Richard Spence

Computing a Euclidean minimum spanning tree of a set of points is a seminal problem in computational geometry and geometric graph theory. We combine it with another classical problem in graph drawing, namely computing a monotone geometric…

Computational Geometry · Computer Science 2024-11-26 Emilio Di Giacomo , Walter Didimo , Eleni Katsanou , Lena Schlipf , Antonios Symvonis , Alexander Wolff

We introduce a decomposition method for the distributed calculation of exact Euclidean Minimum Spanning Trees in high dimensions (where sub-quadratic algorithms are not effective), or more generalized geometric-minimum spanning trees of…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-05 Richard Lettich

For a weighted graph $G = (V, E, w)$ and a designated source vertex $s \in V$, a spanning tree that simultaneously approximates a shortest-path tree w.r.t. source $s$ and a minimum spanning tree is called a shallow-light tree (SLT).…

Computational Geometry · Computer Science 2025-12-12 Hung Le , Shay Solomon , Cuong Than , Csaba D. Tóth , Tianyi Zhang

Choi et. al (2011) introduced a minimum spanning tree (MST)-based method called CLGrouping, for constructing tree-structured probabilistic graphical models, a statistical framework that is commonly used for inferring phylogenetic trees.…

Combinatorics · Mathematics 2017-01-12 Prabhav Kalaghatgi , Thomas Lengauer