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Understanding the relationships between protein sequence, structure and function is a long-standing biological challenge with manifold implications from drug design to our understanding of evolution. Recently, protein language models have…

Quantitative Methods · Quantitative Biology 2024-01-29 Dexiong Chen , Philip Hartout , Paolo Pellizzoni , Carlos Oliver , Karsten Borgwardt

The rise of Large Language Models (LLMs) has accelerated the long-standing goal of enabling natural language querying over complex, hybrid databases. Yet, this ambition exposes a dual challenge: reasoning jointly over structured,…

Databases · Computer Science 2025-10-22 Aymane Hassini

Relation Extraction (RE) is a crucial task in Information Extraction, which entails predicting relationships between entities within a given sentence. However, extending pre-trained RE models to other languages is challenging, particularly…

Computation and Language · Computer Science 2023-04-21 Chiaming Hsu , Changtong Zan , Liang Ding , Longyue Wang , Xiaoting Wang , Weifeng Liu , Fu Lin , Wenbin Hu

Premise selection is a key bottleneck for scaling theorem proving in large formal libraries. Yet existing language-based methods often treat premises in isolation, ignoring the web of dependencies that connects them. We present a…

Machine Learning · Computer Science 2025-12-02 Job Petrovčič , David Eliecer Narvaez Denis , Ljupčo Todorovski

Time series modeling holds significant importance in many real-world applications and has been extensively studied. While pre-trained foundation models have made impressive strides in the fields of natural language processing (NLP) and…

Computation and Language · Computer Science 2025-02-20 Juyuan Zhang , Wei Zhu , Jiechao Gao

Large language models (LLMs) are primarily designed to understand unstructured text. When directly applied to structured formats such as tabular data, they may struggle to discern inherent relationships and overlook critical patterns. While…

Machine Learning · Computer Science 2024-10-11 Natraj Raman , Sumitra Ganesh , Manuela Veloso

This paper introduces the Primender sequence, a novel integer sequence defined by a hybrid rule that combines classical primality with modular digit-based conditions. Specifically, a number n is included in the sequence if it is prime or…

Artificial Intelligence · Computer Science 2025-06-13 Mohd Anwar Jamal Faiz

Recent years have witnessed increasing interests in prompt-based learning in which models can be trained on only a few annotated instances, making them suitable in low-resource settings. When using prompt-based learning for text…

Computation and Language · Computer Science 2023-05-11 Hongjing Li , Hanqi Yan , Yanran Li , Li Qian , Yulan He , Lin Gui

Relational Foundation Models (RFMs) facilitate data-driven decision-making by learning from complex multi-table databases. However, the diverse relational databases needed to train such models are rarely public due to privacy constraints.…

Probing Pre-trained Language Models (PLMs) using prompts has indirectly implied that language models (LMs) can be treated as knowledge bases. To this end, this phenomena has been effective especially when these LMs are fine-tuned towards…

Computation and Language · Computer Science 2022-04-08 M. Abaho , D. Bollegala , P. Williamson , S. Dodd

Recent years have seen rapid development in Information Extraction, as well as its subtask, Relation Extraction. Relation Extraction is able to detect semantic relations between entities in sentences. Currently, many efficient approaches…

Computation and Language · Computer Science 2024-03-19 Zhuang Li

In this paper, we propose a novel SQL guided pre-training framework STAR for context-dependent text-to-SQL parsing, which leverages contextual information to enrich natural language (NL) utterance and table schema representations for…

Computation and Language · Computer Science 2022-10-31 Zefeng Cai , Xiangyu Li , Binyuan Hui , Min Yang , Bowen Li , Binhua Li , Zheng Cao , Weijie Li , Fei Huang , Luo Si , Yongbin Li

Text-to-SQL is a technology that converts natural language queries into the structured query language SQL. A novel research approach that has recently gained attention focuses on methods based on the complexity of SQL queries, achieving…

Computation and Language · Computer Science 2024-06-14 Jiawen Yi , Guo Chen , Zixiang Shen

Paraphrase generation has benefited extensively from recent progress in the designing of training objectives and model architectures. However, previous explorations have largely focused on supervised methods, which require a large amount of…

Computation and Language · Computer Science 2021-09-14 Tong Niu , Semih Yavuz , Yingbo Zhou , Nitish Shirish Keskar , Huan Wang , Caiming Xiong

Machine reading comprehension is a heavily-studied research and test field for evaluating new pre-trained language models (PrLMs) and fine-tuning strategies, and recent studies have enriched the pre-trained language models with syntactic,…

Computation and Language · Computer Science 2022-03-17 Baorong Huang , Zhuosheng Zhang , Hai Zhao

In the domain of data science, the predictive tasks of classification, regression, and imputation of missing values are commonly encountered challenges associated with tabular data. This research endeavors to apply Large Language Models…

Machine Learning · Computer Science 2026-04-23 Yazheng Yang , Yuqi Wang , Yaxuan Li , Sankalok Sen , Lei Li , Lin Qiu , Qi Liu

One of the recent best attempts at Text-to-SQL is the pre-trained language model. Due to the structural property of the SQL queries, the seq2seq model takes the responsibility of parsing both the schema items (i.e., tables and columns) and…

Computation and Language · Computer Science 2023-04-11 Haoyang Li , Jing Zhang , Cuiping Li , Hong Chen

Relation extraction (RE) has achieved remarkable progress with the help of pre-trained language models. However, existing RE models are usually incapable of handling two situations: implicit expressions and long-tail relation classes,…

Computation and Language · Computer Science 2023-10-30 Pawan Kumar Rajpoot , Ankur Parikh

The meanings of words and phrases depend not only on where they are used (contexts) but also on who use them (writers). Pretrained language models (PLMs) are powerful tools for capturing context, but they are typically pretrained and…

Computation and Language · Computer Science 2023-09-15 Daisuke Oba , Naoki Yoshinaga , Masashi Toyoda

A prior-informed large language model (LLM) driven multi-task learning framework is proposed for the unified description of multiple nuclear observables. By fine-tuning the pre-trained DeepSeek-R1-1.5B model with Low-Rank Adaptation (LoRA),…

Nuclear Theory · Physics 2026-05-29 S. J. Guo , S. Y. Wang , E. H. Wang , Z. M. Niu , Y. M. Ding