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We initiate the study of counting Markov Equivalence Classes (MEC) under logical constraints. MECs are equivalence classes of Directed Acyclic Graphs (DAGs) that encode the same conditional independence structure among the random variables…

Logic in Computer Science · Computer Science 2024-05-24 Davide Bizzaro , Luciano Serafini , Sagar Malhotra

In observational studies, the true causal model is typically unknown and needs to be estimated from available observational and limited experimental data. In such cases, the learned causal model is commonly represented as a partially…

Artificial Intelligence · Computer Science 2023-03-01 Malte Luttermann , Marcel Wienöbst , Maciej Liśkiewicz

Randomising networks using a naive `accept-all' edge-swap algorithm is generally biased. Building on recent results for nondirected graphs, we construct an ergodic detailed balance Markov chain with non-trivial acceptance probabilities for…

Quantitative Methods · Quantitative Biology 2011-12-21 E. S. Roberts , A. C. C. Coolen

Ancestral graphs can encode conditional independence relations that arise in directed acyclic graph (DAG) models with latent and selection variables. However, for any ancestral graph, there may be several other graphs to which it is Markov…

Statistics Theory · Mathematics 2009-08-26 R. Ayesha Ali , Thomas S. Richardson , Peter Spirtes

Symmetric independence relations are often studied using graphical representations. Ancestral graphs or acyclic directed mixed graphs with $m$-separation provide classes of symmetric graphical independence models that are closed under…

Statistics Theory · Mathematics 2020-09-14 Søren Wengel Mogensen , Niels Richard Hansen

Causal graphs, such as directed acyclic graphs (DAGs) and partial ancestral graphs (PAGs), represent causal relationships among variables in a model. Methods exist for learning DAGs and PAGs from data and for converting DAGs to PAGs.…

Machine Learning · Statistics 2018-01-19 Nishant Subramani

Causal discovery algorithms typically recover causal graphs only up to their Markov equivalence classes unless additional parametric assumptions are made. The sizes of these equivalence classes reflect the limits of what can be learned…

Machine Learning · Statistics 2025-07-28 Erik Jahn , Frederick Eberhardt , Leonard J. Schulman

Directed acyclic graphs provide a fundamental tool for representing directed dependence structures in multivariate network data, and are widely used to model financial and economic networks. However, accurate and interpretable estimation…

Methodology · Statistics 2026-05-26 Huihang Liu , Wenhui Li , Xinyu Zhang

Different directed acyclic graphs (DAGs) may be Markov equivalent in the sense that they entail the same conditional independence relations among the observed variables. Meek (1995) characterizes Markov equivalence classes for DAGs (with no…

Methodology · Statistics 2012-06-26 Jiji Zhang

Ordered sequences of univariate or multivariate regressions provide statistical models for analysing data from randomized, possibly sequential interventions, from cohort or multi-wave panel studies, but also from cross-sectional or…

Methodology · Statistics 2015-03-19 Nanny Wermuth , Kayvan Sadeghi

The stack number of a directed acyclic graph $G$ is the minimum $k$ for which there is a topological ordering of $G$ and a $k$-coloring of the edges such that no two edges of the same color cross, i.e., have alternating endpoints along the…

Combinatorics · Mathematics 2025-10-29 Paul Jungeblut , Laura Merker , Torsten Ueckerdt

We analyze the properties of degree-preserving Markov chains based on elementary edge switchings in undirected and directed graphs. We give exact yet simple formulas for the mobility of a graph (the number of possible moves) in terms of its…

Disordered Systems and Neural Networks · Physics 2012-03-12 E. S. Roberts , A. Annibale , A. C. C. Coolen

An encoding of directed acyclic graphs (DAGs) on labeled vertices is proposed, which is a generalisation of the Pr\"ufer code for labeled trees, if a certain orienation on the edges of the tree is introduced. Hence it is shown that the…

Combinatorics · Mathematics 2023-04-04 Zsófia Juhász

Enumerating the directed acyclic graphs (DAGs) of a Markov equivalence class (MEC) is an important primitive in causal analysis. The central resource from the perspective of computational complexity is the delay, that is, the time an…

Artificial Intelligence · Computer Science 2023-12-19 Marcel Wienöbst , Malte Luttermann , Max Bannach , Maciej Liśkiewicz

Directed acyclic graphs (DAGs) are commonly used to model causal relationships among random variables. In general, learning the DAG structure is both computationally and statistically challenging. Moreover, without additional information,…

Machine Learning · Statistics 2024-03-26 Ali Shojaie , Wenyu Chen

Acyclic directed mixed graphs (ADMGs) are graphs that contain directed ($\rightarrow$) and bidirected ($\leftrightarrow$) edges, subject to the constraint that there are no cycles of directed edges. Such graphs may be used to represent the…

Statistics Theory · Mathematics 2014-08-15 Robin J. Evans , Thomas S. Richardson

We consider the problem of learning the weighted edges of a balanced mixture of two undirected graphs from epidemic cascades. While mixture models are popular modeling tools, algorithmic development with rigorous guarantees has lagged.…

Social and Information Networks · Computer Science 2020-01-30 Jessica Hoffmann , Soumya Basu , Surbhi Goel , Constantine Caramanis

Random directed acyclic graphs (DAGs) based on imposing an order on Erd\H{o}s-R\'enyi and scale free random graphs are widely used for evaluating causal discovery algorithms. We show that in such DAGs, the set of nodes reachable via open…

Methodology · Statistics 2026-05-08 Alexander G. Reisach , Antoine Chambaz , Gilles Blanchard , Sebastian Weichwald

Two directed acyclic graphs (DAGs) are called Markov equivalent if and only if they have the same underlying undirected graph (i.e. skeleton) and the same set of immoralities. Using observational data, a DAG model can only be determined up…

Combinatorics · Mathematics 2017-06-20 Adityanarayanan Radhakrishnan , Liam Solus , Caroline Uhler

Directed acyclic graphical models, or DAG models, are widely used to represent complex causal systems. Since the basic task of learning such a model from data is NP-hard, a standard approach is greedy search over the space of directed…

Statistics Theory · Mathematics 2021-06-09 Liam Solus , Yuhao Wang , Caroline Uhler