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Strain-level identification of viruses is critical for effective public health responses to potential outbreaks, yet current diagnostic methods often lack the necessary speed or sensitivity. Surface-enhanced Raman spectroscopy (SERS) offers…

Accurate identification of respiratory viruses (RVs) is critical for outbreak control and public health. This study presents a diagnostic system that combines Attenuated Total Reflectance Fourier Transform Infrared Spectroscopy (ATR-FTIR)…

Machine Learning · Computer Science 2025-04-15 Wenwen Zhang , Zhouzhuo Tang , Yingmei Feng , Xia Yu , Qi Jie Wang , Zhiping Lin

The worldwide increase of antimicrobial resistance (AMR) is a serious threat to human health. To avert the spread of AMR, fast reliable diagnostics tools that facilitate optimal antibiotic stewardship are an unmet need. In this regard,…

From the famous 1918 H1N1 influenza to the present COVID-19 pandemic, the need for improved virial detection techniques is all too apparent. The aim of the present paper is to show that identification of individual virus particles in…

Medical Physics · Physics 2020-11-23 V. Deckert , T. Deckert-Gaudig , D. Cialla , J. Popp , R. Zell , A. V. Sokolov , Z. Yi , M. O. Scully

Deep neural networks and other sophisticated machine learning models are widely applied to biomedical signal data because they can detect complex patterns and compute accurate predictions. However, the difficulty of interpreting such models…

Signal Processing · Electrical Eng. & Systems 2021-07-12 Charmaine Chia , Matteo Sesia , Chi-Sing Ho , Stefanie S. Jeffrey , Jennifer Dionne , Emmanuel J. Candès , Roger T. Howe

Rapid identification of bacteria is essential to prevent the spread of infectious disease, help combat antimicrobial resistance, and improve patient outcomes. Raman optical spectroscopy promises to combine bacterial detection,…

Viruses are submicroscopic agents that can infect all kinds of lifeforms and use their hosts' living cells to replicate themselves. Despite having some of the simplest genetic structures among all living beings, viruses are highly…

Computer Vision and Pattern Recognition · Computer Science 2024-05-27 Niloy Sikder , Md. Al-Masrur Khan , Anupam Kumar Bairagi , Mehedi Masud , Jun Jiat Tiang , Abdullah-Al Nahid

Due to increasing threats from malicious software (malware) in both number and complexity, researchers have developed approaches to automatic detection and classification of malware, instead of analyzing methods for malware files manually…

Cryptography and Security · Computer Science 2020-11-02 Ahmed Bensaoud , Nawaf Abudawaood , Jugal Kalita

In the research, we developed a computer vision solution to support diagnostic radiology in differentiating between COVID-19 pneumonia, influenza virus pneumonia, and normal biomarkers. The chest radiograph appearance of COVID-19 pneumonia…

Image and Video Processing · Electrical Eng. & Systems 2021-12-15 Julianna Antonchuk , Benjamin Prescott , Philip Melanchthon , Robin Singh

We found that the real time reverse transcription-polymerase chain reaction (RT-PCR) detection of viral RNA from sputum or nasopharyngeal swab has a relatively low positive rate in the early stage to determine COVID-19 (named by the World…

Artificial intelligence (AI) has brought tremendous impacts on biomedical sciences from academic researches to clinical applications, such as in biomarkers' detection and diagnosis, optimization of treatment, and identification of new…

Quantitative Methods · Quantitative Biology 2023-03-14 Yu-Jia An , Sheng-Chen Bai , Lin Cheng , Xiao-Guang Li , Cheng-en Wang , Xiao-Dong Han , Gang Su , Shi-Ju Ran , Cong Wang

Artificial neural network (ANN) ability to learn, correct errors, and transform a large amount of raw data into useful medical decisions for treatment and care have increased its popularity for enhanced patient safety and quality of care.…

Machine Learning · Computer Science 2021-12-08 Muhammad Azeem , Shumaila Javaid , Hamza Fahim , Nasir Saeed

The classification of different grapevine varieties is a relevant phenotyping task in Precision Viticulture since it enables estimating the growth of vineyard rows dedicated to different varieties, among other applications concerning the…

Computer Vision and Pattern Recognition · Computer Science 2024-07-30 Alfonso López , Carlos Javier Ogayar , Francisco Ramón Feito , Joaquim João Sousa

The combination of Deep Learning techniques and Raman spectroscopy shows great potential offering precise and prompt identification of pathogenic bacteria in clinical settings. However, the traditional closed-set classification approaches…

Quantitative Methods · Quantitative Biology 2023-10-24 Yaroslav Balytskyi , Nataliia Kalashnyk , Inna Hubenko , Alina Balytska , Kelly McNear

Influenza viruses mutate rapidly and can pose a threat to public health, especially to those in vulnerable groups. Throughout history, influenza A viruses have caused pandemics between different species. It is important to identify the…

Machine Learning · Computer Science 2024-05-24 Yanhua Xu , Dominik Wojtczak

Convolutional neural networks (CNN) are known for their excellent feature extraction capabilities to enable the learning of models from data, yet are used as black boxes. An interpretation of the convolutional filtres and associated…

Machine Learning · Computer Science 2022-07-27 Shagufta Henna , Juan Miguel Lopez Alcaraz

Facial acne is a common disease, especially among adolescents, negatively affecting both physically and psychologically. Classifying acne is vital to providing the appropriate treatment. Traditional visual inspection or expert scanning is…

Computer Vision and Pattern Recognition · Computer Science 2025-03-05 Afsana Ahsan Jeny , Masum Shah Junayed , Md Robel Mia , Md Baharul Islam

Bird strikes pose a significant threat to aviation safety, often resulting in loss of life, severe aircraft damage, and substantial financial costs. Existing bird strike prevention strategies primarily rely on avian radar systems that…

Computer Vision and Pattern Recognition · Computer Science 2026-02-10 Elaheh Sabziyan Varnousfaderani , Syed A. M. Shihab , Jonathan King

Recent advances in healthcare technologies have led to the availability of large amounts of biological samples across several techniques and applications. In particular, in the last few years, Raman spectroscopy analysis of biological…

Quantitative Methods · Quantitative Biology 2025-06-24 Marco Piazza , Andrea Spinelli , Francesca Maggioni , Marzia Bedoni , Enza Messina

Coronavirus Disease 2019 (COVID-19) demonstrated the need for accurate and fast diagnosis methods for emergent viral diseases. Soon after the emergence of COVID-19, medical practitioners used X-ray and computed tomography (CT) images of…

Image and Video Processing · Electrical Eng. & Systems 2021-01-22 Weihan Zhang , Bryan Pogorelsky , Mark Loveland , Trevor Wolf
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