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The all pairs shortest path problem (APSP) is one of the foundational problems in computer science. For weighted dense graphs on $n$ vertices, no truly sub-cubic algorithms exist to compute APSP exactly even for undirected graphs. This is…

Data Structures and Algorithms · Computer Science 2023-09-26 Barna Saha , Christopher Ye

The single-source shortest path problem (SSSP) with nonnegative edge weights is a notoriously difficult problem to solve efficiently in parallel---it is one of the graph problems said to suffer from the transitive-closure bottleneck. In…

Data Structures and Algorithms · Computer Science 2016-03-15 Guy E. Blelloch , Yan Gu , Yihan Sun , Kanat Tangwongsan

We present a deep Graph Convolutional Kernel Machine (GCKM) for semi-supervised node classification in graphs. The method is built of two main types of blocks: (i) We introduce unsupervised kernel machine layers propagating the node…

Machine Learning · Computer Science 2024-04-16 Sonny Achten , Francesco Tonin , Panagiotis Patrinos , Johan A. K. Suykens

Graphs are complex objects that do not lend themselves easily to typical learning tasks. Recently, a range of approaches based on graph kernels or graph neural networks have been developed for graph classification and for representation…

Machine Learning · Computer Science 2022-05-19 Chen Cai , Yusu Wang

Single Source Shortest Paths ($\textrm{SSSP}$) is among the most well-studied problems in computer science. In the incremental (resp. decremental) setting, the goal is to maintain distances from a fixed source in a graph undergoing edge…

Data Structures and Algorithms · Computer Science 2024-07-16 Barna Saha , Virginia Vassilevska Williams , Yinzhan Xu , Christopher Ye

The bi-objective shortest-path (BOSP) problem seeks to find paths between start and target vertices of a graph while optimizing two conflicting objective functions. We consider the BOSP problem in the presence of correlated objectives. Such…

Artificial Intelligence · Computer Science 2025-09-26 Yaron Halle , Ariel Felner , Sven Koenig , Oren Salzman

In deep neural networks, better results can often be obtained by increasing the complexity of previously developed basic models. However, it is unclear whether there is a way to boost performance by decreasing the complexity of such models.…

Machine Learning · Computer Science 2022-06-07 Junran Wu , Shangzhe Li , Jianhao Li , Yicheng Pan , Ke Xu

What is the best way to match the nodes of two graphs? This graph alignment problem generalizes graph isomorphism and arises in applications from social network analysis to bioinformatics. Some solutions assume that auxiliary information on…

Information Retrieval · Computer Science 2021-06-14 Judith Hermanns , Anton Tsitsulin , Marina Munkhoeva , Alex Bronstein , Davide Mottin , Panagiotis Karras

The computation of distance measures between nodes in graphs is inefficient and does not scale to large graphs. We explore dense vector representations as an effective way to approximate the same information: we introduce a simple yet…

Computation and Language · Computer Science 2019-06-18 Andrey Kutuzov , Mohammad Dorgham , Oleksiy Oliynyk , Chris Biemann , Alexander Panchenko

Graph Neural Networks (GNNs) have been widely employed for feature representation learning in molecular graphs. Therefore, it is crucial to enhance the expressiveness of feature representation to ensure the effectiveness of GNNs. However, a…

Machine Learning · Computer Science 2024-09-16 Chengyu Yao , Hong Huang , Hang Gao , Fengge Wu , Haiming Chen , Junsuo Zhao

In this paper, we propose a novel graph kernel specifically to address a challenging problem in the field of cyber-security, namely, malware detection. Previous research has revealed the following: (1) Graph representations of programs are…

Cryptography and Security · Computer Science 2016-06-22 Annamalai Narayanan , Guozhu Meng , Liu Yang , Jinliang Liu , Lihui Chen

Given a connected undirected weighted graph, we are concerned with problems related to partitioning the graph. First of all we look for the closest disconnected graph (the minimum cut problem), here with respect to the Euclidean norm. We…

Numerical Analysis · Mathematics 2017-12-19 Eleonora Andreotti , Dominik Edelmann , Nicola Guglielmi , Christian Lubich

We present a novel framework based on optimal transport for the challenging problem of comparing graphs. Specifically, we exploit the probabilistic distribution of smooth graph signals defined with respect to the graph topology. This allows…

Machine Learning · Computer Science 2019-12-09 Hermina Petric Maretic , Mireille EL Gheche , Giovanni Chierchia , Pascal Frossard

Graph neural networks have attracted wide attentions to enable representation learning of graph data in recent works. In complement to graph convolution operators, graph pooling is crucial for extracting hierarchical representation of graph…

Machine Learning · Computer Science 2020-06-22 Xing Gao , Wenrui Dai , Chenglin Li , Hongkai Xiong , Pascal Frossard

Nowadays, the coupling of electronic structure and machine learning techniques serves as a powerful tool to predict chemical and physical properties of a broad range of systems. With the aim of improving the accuracy of predictions, a large…

Graph kernels methods are based on an implicit embedding of graphs within a vector space of large dimension. This implicit embedding allows to apply to graphs methods which where until recently solely reserved to numerical data. Within the…

Computer Vision and Pattern Recognition · Computer Science 2008-10-21 François-Xavier Dupé , Luc Brun

The Minimum Consistent Subset (MCS) problem arises naturally in the context of supervised clustering and instance selection. In supervised clustering, one aims to infer a meaningful partitioning of data using a small labeled subset.…

Data Structures and Algorithms · Computer Science 2025-12-16 Aritra Banik , Mano Prakash Parthasarathi , Venkatesh Raman , Diya Roy , Abhishek Sahu

Constructing a similarity graph from a set $X$ of data points in $\mathbb{R}^d$ is the first step of many modern clustering algorithms. However, typical constructions of a similarity graph have high time complexity, and a quadratic space…

Data Structures and Algorithms · Computer Science 2023-10-24 Peter Macgregor , He Sun

Acquiring labels are often costly, whereas unlabeled data are usually easy to obtain in modern machine learning applications. Semi-supervised learning provides a principled machine learning framework to address such situations, and has been…

Machine Learning · Computer Science 2017-04-07 Trung Le , Khanh Nguyen , Van Nguyen , Vu Nguyen , Dinh Phung

Graph convolutional networks gain remarkable success in semi-supervised learning on graph structured data. The key to graph-based semisupervised learning is capturing the smoothness of labels or features over nodes exerted by graph…

Machine Learning · Computer Science 2020-08-03 Bingbing Xu , Huawei Shen , Qi Cao , Keting Cen , Xueqi Cheng