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In this work we introduce Labrador, a pre-trained Transformer model for laboratory data. Labrador and BERT were pre-trained on a corpus of 100 million lab test results from electronic health records (EHRs) and evaluated on various…

Computation and Language · Computer Science 2024-12-06 David R. Bellamy , Bhawesh Kumar , Cindy Wang , Andrew Beam

Encoder-based transformer models are central to biomedical and clinical Natural Language Processing (NLP), as their bidirectional self-attention makes them well-suited for efficiently extracting structured information from unstructured text…

Pre-training a language model and then fine-tuning it for downstream tasks has demonstrated state-of-the-art results for various NLP tasks. Pre-training is usually independent of the downstream task, and previous works have shown that this…

Computation and Language · Computer Science 2022-11-28 Tanish Lad , Himanshu Maheshwari , Shreyas Kottukkal , Radhika Mamidi

State-of-the-art performance on language understanding tasks is now achieved with increasingly large networks; the current record holder has billions of parameters. Given a language model pre-trained on massive unlabeled text corpora, only…

Computation and Language · Computer Science 2020-04-30 Evani Radiya-Dixit , Xin Wang

Large Language Models (LLMs), particularly those similar to ChatGPT, have significantly influenced the field of Natural Language Processing (NLP). While these models excel in general language tasks, their performance in domain-specific…

Computation and Language · Computer Science 2024-01-02 Omid Rohanian , Mohammadmahdi Nouriborji , David A. Clifton

The ubiquity of the contemporary language understanding tasks gives relevance to the development of generalized, yet highly efficient models that utilize all knowledge, provided by the data source. In this work, we present SocialBERT - the…

Computation and Language · Computer Science 2021-11-16 Ilia Karpov , Nick Kartashev

Forensic author profiling plays an important role in indicating possible profiles for suspects. Among the many automated solutions recently proposed for author profiling, transfer learning outperforms many other state-of-the-art techniques…

Computation and Language · Computer Science 2021-09-29 Esam Alzahrani , Leon Jololian

Recent advancements in computational chemistry have leveraged the power of trans-former-based language models, such as MoLFormer, pre-trained using a vast amount of simplified molecular-input line-entry system (SMILES) sequences, to…

Biomolecules · Quantitative Biology 2024-11-05 Tianhao Peng , Yuchen Li , Xuhong Li , Jiang Bian , Zeke Xie , Ning Sui , Shahid Mumtaz , Yanwu Xu , Linghe Kong , Haoyi Xiong

This paper presents several BERT-based models for Russian language biomedical text mining (RuBioBERT, RuBioRoBERTa). The models are pre-trained on a corpus of freely available texts in the Russian biomedical domain. With this pre-training,…

Computation and Language · Computer Science 2022-04-11 Alexander Yalunin , Alexander Nesterov , Dmitriy Umerenkov

Transformer-based pretrained language models (PLMs) have started a new era in modern natural language processing (NLP). These models combine the power of transformers, transfer learning, and self-supervised learning (SSL). Following the…

Computation and Language · Computer Science 2021-09-03 Katikapalli Subramanyam Kalyan , Ajit Rajasekharan , Sivanesan Sangeetha

The field of natural language processing (NLP) has made significant progress with the rapid development of deep learning technologies. One of the research directions in text sentiment analysis is sentiment analysis of medical texts, which…

Computation and Language · Computer Science 2024-12-04 Yinan Chen

Transformers are the current state-of-the-art of natural language processing in many domains and are using traction within software engineering research as well. Such models are pre-trained on large amounts of data, usually from the general…

Software Engineering · Computer Science 2022-05-16 Julian von der Mosel , Alexander Trautsch , Steffen Herbold

Malicious URL detection and webpage classification are critical tasks in cybersecurity and information management. In recent years, extensive research has explored using BERT or similar language models to replace traditional machine…

Cryptography and Security · Computer Science 2025-05-27 Yujie Li , Yiwei Liu , Peiyue Li , Yifan Jia , Yanbin Wang

Pre-trained language models have been dominating the field of natural language processing in recent years, and have led to significant performance gains for various complex natural language tasks. One of the most prominent pre-trained…

Computation and Language · Computer Science 2020-09-17 Pieter Delobelle , Thomas Winters , Bettina Berendt

Much of natural language processing is focused on leveraging large capacity language models, typically trained over single messages with a task of predicting one or more tokens. However, modeling human language at higher-levels of context…

Computation and Language · Computer Science 2021-11-03 Matthew Matero , Nikita Soni , Niranjan Balasubramanian , H. Andrew Schwartz

Identifying arguments is a necessary prerequisite for various tasks in automated discourse analysis, particularly within contexts such as political debates, online discussions, and scientific reasoning. In addition to theoretical advances…

Computation and Language · Computer Science 2025-05-29 Marc Feger , Katarina Boland , Stefan Dietze

Bidirectional Encoder Representations from Transformers (BERT) has shown marvelous improvements across various NLP tasks, and its consecutive variants have been proposed to further improve the performance of the pre-trained language models.…

Computation and Language · Computer Science 2021-11-29 Yiming Cui , Wanxiang Che , Ting Liu , Bing Qin , Ziqing Yang

Pre-trained Large Language Models (LLMs) often struggle on out-of-domain datasets like healthcare focused text. We explore specialized pre-training to adapt smaller LLMs to different healthcare datasets. Three methods are assessed:…

Computation and Language · Computer Science 2024-04-01 Niall Taylor , Dan Schofield , Andrey Kormilitzin , Dan W Joyce , Alejo Nevado-Holgado

This study proposes a medical entity extraction method based on Transformer to enhance the information extraction capability of medical literature. Considering the professionalism and complexity of medical texts, we compare the performance…

Computation and Language · Computer Science 2025-04-08 Xiaokai Wang , Guiran Liu , Binrong Zhu , Jacky He , Hongye Zheng , Hanlu Zhang

Deep neural language models have set new breakthroughs in many tasks of Natural Language Processing (NLP). Recent work has shown that deep transformer language models (pretrained on large amounts of texts) can achieve high levels of…

Computation and Language · Computer Science 2022-06-02 Milad Moradi , Kathrin Blagec , Florian Haberl , Matthias Samwald