Related papers: PathologyBERT -- Pre-trained Vs. A New Transformer…
This paper presents a novel approach to accurately classify the hallmarks of cancer, which is a crucial task in cancer research. Our proposed method utilizes the Bidirectional Encoder Representations from Transformers (BERT) architecture,…
Pre-trained language models (PLMs) like BERT are being used for almost all language-related tasks, but interpreting their behavior still remains a significant challenge and many important questions remain largely unanswered. In this work,…
The practice of fine-tuning Pre-trained Language Models (PLMs) from general or domain-specific data to a specific task with limited resources, has gained popularity within the field of natural language processing (NLP). In this work, we…
Multi-task learning (MTL) has achieved remarkable success in natural language processing applications. In this work, we study a multi-task learning model with multiple decoders on varieties of biomedical and clinical natural language…
Can pre-trained BERT for one language and GPT for another be glued together to translate texts? Self-supervised training using only monolingual data has led to the success of pre-trained (masked) language models in many NLP tasks. However,…
This paper introduces an approach that combines the language reasoning capabilities of large language models (LLMs) with the benefits of local training to tackle complex, domain-specific tasks. Specifically, the authors demonstrate their…
This paper presents UniBERT, a compact multilingual language model that uses an innovative training framework that integrates three components: masked language modeling, adversarial training, and knowledge distillation. Pre-trained on a…
Vision-language foundation models have shown great promise in computational pathology but remain primarily data-driven, lacking explicit integration of medical knowledge. We introduce KEEP (KnowledgE-Enhanced Pathology), a foundation model…
Pretrained language models based on the Transformer architecture have achieved state-of-the-art results in various natural language processing tasks such as part-of-speech tagging, named entity recognition, and question answering. However,…
Transformer based pre-trained models such as BERT and its variants, which are trained on large corpora, have demonstrated tremendous success for natural language processing (NLP) tasks. Most of academic works are based on the English…
Since the introduction of the original BERT (i.e., BASE BERT), researchers have developed various customized BERT models with improved performance for specific domains and tasks by exploiting the benefits of transfer learning. Due to the…
Language model pre-training has shown promising results in various downstream tasks. In this context, we introduce a cross-modal pre-trained language model, called Speech-Text BERT (ST-BERT), to tackle end-to-end spoken language…
Significant advances have been made in recent years on Natural Language Processing with machines surpassing human performance in many tasks, including but not limited to Question Answering. The majority of deep learning methods for Question…
We introduce AnnualBERT, a series of language models designed specifically to capture the temporal evolution of scientific text. Deviating from the prevailing paradigms of subword tokenizations and "one model to rule them all", AnnualBERT…
As opposed to general English, many concepts in biomedical terminology have been designed in recent history by biomedical professionals with the goal of being precise and concise. This is often achieved by concatenating meaningful…
The introduction of Large Language Models (LLMs), and the vast volume of publicly available medical data, amplified the application of NLP to the medical domain. However, LLMs are pretrained on data that are not explicitly relevant to the…
The exponential increase in scientific literature and online information necessitates efficient methods for extracting knowledge from textual data. Natural language processing (NLP) plays a crucial role in addressing this challenge,…
Pre-trained Transformer-based models have achieved state-of-the-art performance for various Natural Language Processing (NLP) tasks. However, these models often have billions of parameters, and, thus, are too resource-hungry and…
Pretrained language models have served as important backbones for natural language processing. Recently, in-domain pretraining has been shown to benefit various domain-specific downstream tasks. In the biomedical domain, natural language…
The availability of biomedical text data and advances in natural language processing (NLP) have made new applications in biomedical NLP possible. Language models trained or fine tuned using domain specific corpora can outperform general…