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Pairwise ordered tree alignment are combinatorial objects that appear in RNA secondary structure comparison. However, the usual representation of tree alignments as supertrees is ambiguous, i.e. two distinct supertrees may induce identical…

Quantitative Methods · Quantitative Biology 2016-03-08 Cedric Chauve , Julien Courtiel , Yann Ponty

We consider infinite Galton-Watson trees without leaves together with i.i.d.~random variables called marks on each of their vertices. We define a class of flow rules on marked Galton-Watson trees for which we are able, under some algebraic…

Probability · Mathematics 2018-05-07 Pierre Rousselin

We consider fixed-point equations for probability measures charging measured compact metric spaces that naturally yield continuum random trees. On the one hand, we study the existence/uniqueness of the fixed-points and the convergence of…

Probability · Mathematics 2021-05-05 Nicolas Broutin , Henning Sulzbach

In this thesis the properties of two kinds of non-uniform random recursive trees are studied. In the first model weights are assigned to each node, thus altering the attachment probabilities. We will call these trees weighted recursive…

Probability · Mathematics 2017-10-05 Ella Hiesmayr

We prove some asymptotic results for the radius and the profile of large random bipartite planar maps. Using a bijection due to Bouttier, Di Francesco and Guitter between rooted bipartite planar maps and certain two-type trees with positive…

Probability · Mathematics 2007-05-23 Mathilde Weill

Consider an infinite, rooted, connected graph where each vertex is labelled with an independent and identically distributed Uniform(0,1) random variable, plus a parameter $\theta$ times its distance from the root $\rho$. That is, we label…

Probability · Mathematics 2026-05-15 Diana De Armas Bellon , Matthew I. Roberts

Applying a method to reconstruct a phylogenetic tree from random data provides a way to detect whether that method has an inherent bias towards certain tree `shapes'. For maximum parsimony, applied to a sequence of random 2-state data, each…

Populations and Evolution · Quantitative Biology 2014-06-03 Mareike Fischer , Michelle Galla , Lina Herbst , Mike Steel

We consider unimodular random rooted trees (URTs) and invariant forests in Cayley graphs. We show that URTs of bounded degree are the same as the law of the component of the root in an invariant percolation on a regular tree. We use this to…

Probability · Mathematics 2019-02-20 Itai Benjamini , Russell Lyons , Oded Schramm

We prove a strong form of the invariance under re-rooting of the distribution of the continuous random trees called Levy trees. This extends previous results due to several authors.

Probability · Mathematics 2009-02-24 Thomas Duquesne , Jean-Francois Le Gall

The rotor walk on a graph is a deterministic analogue of random walk. Each vertex is equipped with a rotor, which routes the walker to the neighbouring vertices in a fixed cyclic order on successive visits. We consider rotor walk on an…

Combinatorics · Mathematics 2010-09-27 Omer Angel , Alexander E. Holroyd

We consider the probability that a spanning tree chosen uniformly at random from a graph can be partitioned into a fixed number $k$ of trees of equal size by removing $k-1$ edges. In that case, the spanning tree is called {\em splittable}.…

Data Structures and Algorithms · Computer Science 2026-02-25 David Gillman , Jacob Platnick , Dana Randall

We consider a random walk on a Galton-Watson tree whose offspring distribution has a regular varying tail of order $\kappa\in (1,2)$. We prove the convergence of the renormalised height function of the walk towards the continuous-time…

Probability · Mathematics 2024-03-27 Dongjian Qian , Yang Xiao

We define a bivariate polynomial for unlabeled rooted trees and show that the polynomial of an unlabeled rooted tree $T$ is the generating function of a class of subtrees of $T$. We prove that the polynomial is a complete isomorphism…

Combinatorics · Mathematics 2020-02-13 Pengyu Liu

We show that for many models of random trees, the independence number divided by the size converges almost surely to a constant as the size grows to infinity; the trees that we consider include random recursive trees, binary and $m$-ary…

Probability · Mathematics 2020-03-23 Svante Janson

Using topological summaries of gene trees as a basis for species tree inference is a promising approach to obtain acceptable speed on genomic-scale datasets, and to avoid some undesirable modeling assumptions. Here we study the…

Populations and Evolution · Quantitative Biology 2017-04-17 Elizabeth S. Allman , James H. Degnan , John A. Rhodes

This thesis examines linearly edge-reinforced random walks on infinite trees. In particular, recurrence and transience of such random walks on general (fixed) trees as well as on Galton-Watson trees (i.e. random trees) is characterized, and…

Probability · Mathematics 2023-09-01 Fabian Michel

We prove local convergence results of rerooted conditioned multi-type Galton--Watson trees. The limit objects are multitype variants of the random sin-tree constructed by Aldous (1991), and differ according to which types recur infinitely…

Probability · Mathematics 2021-02-24 Benedikt Stufler

A degree sequence is a sequence ${\bf s}=(N_i,i\geq 0)$ of non-negative integers satisfying $1+\sum_i iN_i=\sum_i N_i<\infty$. We are interested in the uniform distribution $\mathbb{P}_{{\bf s}}$ on rooted plane trees whose degree sequence…

Probability · Mathematics 2020-08-28 Osvaldo Angtuncio , Gerónimo Uribe Bravo

We study a notion of potential isomorphism, where two structures are said to be potentially isomorphic if they are isomorphic in some generic extension that preserves stationary sets and does not add new sets of cardinality less than the…

Logic · Mathematics 2007-05-23 Alex Hellsten , Tapani Hyttinen , Saharon Shelah

By considering a continuous pruning procedure on Aldous's Brownian tree, we construct a random variable $\Theta$ which is distributed, conditionally given the tree, according to the probability law introduced by Janson as the limit…

Probability · Mathematics 2013-05-14 Romain Abraham , Jean-François Delmas
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