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The PyProcar Python package plots the band structure and the Fermi surface as a function of site and/or s,p,d,f - projected wavefunctions obtained for each $k$-point in the Brillouin zone and band in an electronic structure calculation.…

Materials Science · Physics 2019-12-23 Uthpala Herath , Pedram Tavadze , Xu He , Eric Bousquet , Sobhit Singh , Francisco Muñoz , Aldo H. Romero

Motivation: Revealing structural variations across sequences of closely related individuals or species is crucial for understanding their diversification mechanisms and roles. Results: We developed PatchWorkPlot, a tool for visualization of…

Quantitative Methods · Quantitative Biology 2025-03-27 Mariia Pospelova , Yana Safonova

Background and Objective: Deep learning enables tremendous progress in medical image analysis. One driving force of this progress are open-source frameworks like TensorFlow and PyTorch. However, these frameworks rarely address issues…

Image and Video Processing · Electrical Eng. & Systems 2021-04-29 Alain Jungo , Olivier Scheidegger , Mauricio Reyes , Fabian Balsiger

In the era of large time-domain spectro-photometric surveys, surface variations such as starspots, chemical inhomogeneities, pulsations, rotational distortions, and binary interactions can now be directly detected and modelled. Accurately…

Solar and Stellar Astrophysics · Physics 2025-11-17 M. Jabłońska , T. Różański , L. Casagrande , H. Shah , P. A. Kołaczek-Szymański , M. Rychlicki , Yuan-Sen Ting

SkyPy is an open-source Python package for simulating the astrophysical sky. It comprises a library of physical and empirical models across a range of observables and a command-line script to run end-to-end simulations. The library provides…

OrbDot is a Python package for studying the secular (long-term) evolution of exoplanet orbits from observational data. It employs nested sampling algorithms to fit evolutionary models to any combination of transit and eclipse mid-times,…

Instrumentation and Methods for Astrophysics · Physics 2025-09-08 Simone R. Hagey , Aaron Boley

Pattern matching is a powerful tool for symbolic computations. Applications include term rewriting systems, as well as the manipulation of symbolic expressions, abstract syntax trees, and XML and JSON data. It also allows for an intuitive…

Programming Languages · Computer Science 2017-10-09 Manuel Krebber , Henrik Barthels , Paolo Bientinesi

Fruitbat is an open source Python 2/3 package for estimating redshifts, energies and the galactic dispersion measure contributions of fast radio bursts (FRBs). Fruitbat combines various dispersion measure (DM) and redshift relations with…

Instrumentation and Methods for Astrophysics · Physics 2019-05-14 Adam J. Batten

SHallow REcurrent Decoders (SHRED) provide a deep learning strategy for modeling high-dimensional dynamical systems and/or spatiotemporal data from dynamical system snapshot observations. PySHRED is a Python package that implements SHRED…

Machine Learning · Computer Science 2025-07-29 David Ye , Jan Williams , Mars Gao , Stefano Riva , Matteo Tomasetto , David Zoro , J. Nathan Kutz

We provide an overview of results relating to estimation and weak-instrument-robust inference in instrumental variables regression. Methods are implemented in the ivmodels software package for Python, which we use to illustrate results.

Econometrics · Economics 2025-08-19 Malte Londschien

We introduce PyPhonPlan, a Python toolkit for implementing dynamical models of phonetic planning using coupled dynamic neural fields and task dynamic simulations. The toolkit provides modular components for defining planning, perception and…

Computation and Language · Computer Science 2026-03-18 Sam Kirkham

Much of the progress made in time-domain astronomy is accomplished by relating observational multi-wavelength time series data to models derived from our understanding of physical laws. This goal is typically accomplished by dividing the…

Instrumentation and Methods for Astrophysics · Physics 2018-05-23 James Guillochon , Matt Nicholl , V. Ashley Villar , Brenna Mockler , Gautham Narayan , Kaisey S. Mandel , Edo Berger , Peter K. G. Williams

Accurate visualization of double star astrometric data is essential for effective analysis and interpretation. This article presents a Python toolkit designed for astronomers who need to plot measurements from diverse sources -- historical,…

Instrumentation and Methods for Astrophysics · Physics 2025-02-21 Xinyue Wang

swdatatoolkit is a Python-based scientific software library designed to support the acquisition, preprocessing, and analysis of solar and space weather data. The toolkit consolidates functionality across multiple domains, including data…

Instrumentation and Methods for Astrophysics · Physics 2026-04-27 Dustin Kempton , Griffin Goodwin , Tarun Kumar Reddy Thippareddy , Reet Gupta , Viacheslav Sadykov , Rafal Angryk

We present a major update of the program pySecDec, a toolbox for the evaluation of dimensionally regulated parameter integrals. The new version enables the evaluation of multi-loop integrals as well as amplitudes in a highly distributed and…

High Energy Physics - Phenomenology · Physics 2023-12-22 G. Heinrich , S. P. Jones , M. Kerner , V. Magerya , A. Olsson , J. Schlenk

The apsis toolkit presented in this paper provides a flexible framework for hyperparameter optimization and includes both random search and a bayesian optimizer. It is implemented in Python and its architecture features adaptability to any…

Machine Learning · Computer Science 2015-03-17 Frederik Diehl , Andreas Jauch

CMasher is a Python package that provides a curated collection of scientific colormaps, showcased in the online documentation (https://cmasher.readthedocs.io). The colormaps in CMasher are all designed to be perceptually uniform sequential…

Image and Video Processing · Electrical Eng. & Systems 2020-03-03 Ellert van der Velden

We present astroplan - an open source, open development, Astropy affiliated package for ground-based observation planning and scheduling in Python. astroplan is designed to provide efficient access to common observational quantities such as…

scikit-multilearn is a Python library for performing multi-label classification. The library is compatible with the scikit/scipy ecosystem and uses sparse matrices for all internal operations. It provides native Python implementations of…

Machine Learning · Computer Science 2018-12-11 Piotr Szymański , Tomasz Kajdanowicz

EpiLearn is a Python toolkit developed for modeling, simulating, and analyzing epidemic data. Although there exist several packages that also deal with epidemic modeling, they are often restricted to mechanistic models or traditional…

Machine Learning · Computer Science 2024-09-10 Zewen Liu , Yunxiao Li , Mingyang Wei , Guancheng Wan , Max S. Y. Lau , Wei Jin
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