PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences
Quantitative Methods
2025-03-27 v1
Abstract
Motivation: Revealing structural variations across sequences of closely related individuals or species is crucial for understanding their diversification mechanisms and roles. Results: We developed PatchWorkPlot, a tool for visualization of pairwise alignments of multiple annotated sequences as dot plots combined into a single matrix. Availability and implementation: PatchWorkPlot is implemented using Python 3 and is publicly available at GitHub: github.com/yana-safonova/PatchWorkPlot.
Cite
@article{arxiv.2503.20766,
title = {PatchWorkPlot: simultaneous visualization of local alignments across multiple sequences},
author = {Mariia Pospelova and Yana Safonova},
journal= {arXiv preprint arXiv:2503.20766},
year = {2025}
}