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The proliferation of Large Language Models (LLMs) and Intelligent Virtual Agents acting as psychotherapists presents significant opportunities for expanding mental healthcare access. However, their deployment has also been linked to serious…

Computation and Language · Computer Science 2025-09-23 Ian Steenstra , Timothy W. Bickmore

Mobile health (mHealth) systems help researchers monitor and care for patients in real-world settings. Studies utilizing mHealth applications use Ecological Momentary Assessment (EMAs), passive sensing, and contextual features to develop…

Enzyme mining is rapidly evolving as a data-driven strategy to identify biocatalysts with tailored functions from the vast landscape of uncharacterized proteins. The integration of machine learning into these workflows enables…

Biomolecules · Quantitative Biology 2025-07-11 Yanzi Zhang , Felix Moorhoff , Sizhe Qiu , Wenjuan Dong , David Medina-Ortiz , Jing Zhao , Mehdi D. Davari

Large Language Models (LLMs) have shown useful applications in a variety of tasks, including data wrangling. In this paper, we investigate the use of an off-the-shelf LLM for schema matching. Our objective is to identify semantic…

Databases · Computer Science 2024-07-17 Marcel Parciak , Brecht Vandevoort , Frank Neven , Liesbet M. Peeters , Stijn Vansummeren

We propose the LLMs4OL approach, which utilizes Large Language Models (LLMs) for Ontology Learning (OL). LLMs have shown significant advancements in natural language processing, demonstrating their ability to capture complex language…

Artificial Intelligence · Computer Science 2023-08-03 Hamed Babaei Giglou , Jennifer D'Souza , Sören Auer

Multimodal artificial intelligence (AI) systems have the potential to enhance clinical decision-making by interpreting various types of medical data. However, the effectiveness of these models across all medical fields is uncertain. Each…

Foundational Models (FMs) are gaining increasing attention in the biomedical AI ecosystem due to their ability to represent and contextualize multimodal biomedical data. These capabilities make FMs a valuable tool for a variety of tasks,…

Healthcare data are generated in many different formats, which makes it difficult to integrate and reuse across institutions and studies. Standardisation is required to enable consistent large-scale analysis. The OMOP-CDM, developed by the…

Quantitative Methods · Quantitative Biology 2025-11-13 Jacob Desmond , Ryan Wartmann , Chng Wei Lau , Steven Thomas , Paul M. Middleton , Jeewani Anupama Ginige

Commonly, AI or machine learning (ML) models are evaluated on benchmark datasets. This practice supports innovative methodological research, but benchmark performance can be poorly correlated with performance in real-world applications -- a…

Machine Learning · Computer Science 2024-06-18 Olivier Binette , Jerome P. Reiter

Mappings between related ontologies are increasingly used to support data integration and analysis tasks. Changes in the ontologies also require the adaptation of ontology mappings. So far the evolution of ontology mappings has received…

Databases · Computer Science 2012-04-13 Anika Gross , Michael Hartung , Andreas Thor , Erhard Rahm

Effective Operation and Maintenance (O&M) is critical to reducing the Levelised Cost of Energy (LCOE) from wind power, yet the unstructured, free-text nature of turbine maintenance logs presents a significant barrier to automated analysis.…

Computation and Language · Computer Science 2026-04-14 Max Malyi , Jonathan Shek , Alasdair McDonald , Andre Biscaya

Machine learning (ML) algorithms have emerged in many meteorological applications. However, these algorithms struggle to extrapolate beyond the data they were trained on, i.e., they may adopt faulty strategies that lead to catastrophic…

Computer Vision and Pattern Recognition · Computer Science 2026-03-02 Nathan Mitchell , Lander Ver Hoef , Imme Ebert-Uphoff , Kristina Moen , Kyle Hilburn , Yoonjin Lee , Emily J. King

Open Information Extraction (OIE) task aims at extracting structured facts from unstructured text, typically in the form of (subject, relation, object) triples. Despite the potential of large language models (LLMs) like ChatGPT as a general…

Computation and Language · Computer Science 2023-09-08 Chen Ling , Xujiang Zhao , Xuchao Zhang , Yanchi Liu , Wei Cheng , Haoyu Wang , Zhengzhang Chen , Takao Osaki , Katsushi Matsuda , Haifeng Chen , Liang Zhao

To address the requirement of enabling a comprehensive perspective of life-sciences data, Semantic Web technologies have been adopted for standardized representations of data and linkages between data. This has resulted in data warehouses…

Databases · Computer Science 2016-02-03 HyeongSik Kim , Kemafor Anyanwu

Ontology learning in complex domains, such as life sciences, poses significant challenges for current Large Language Models (LLMs). Existing LLMs struggle to generate ontologies with multiple hierarchical levels, rich interconnections, and…

Artificial Intelligence · Computer Science 2024-12-04 Nadeen Fathallah , Steffen Staab , Alsayed Algergawy

Automating ontology construction and curation is an important but challenging task in knowledge engineering and artificial intelligence. Prediction by machine learning techniques such as contextual semantic embedding is a promising…

Artificial Intelligence · Computer Science 2023-03-21 Jiaoyan Chen , Yuan He , Yuxia Geng , Ernesto Jimenez-Ruiz , Hang Dong , Ian Horrocks

Unlabeled data is often abundant in the clinic, making machine learning methods based on semi-supervised learning a good match for this setting. Despite this, they are currently receiving relatively little attention in medical image…

Computer Vision and Pattern Recognition · Computer Science 2020-10-26 Valentyn Melnychuk , Evgeniy Faerman , Ilja Manakov , Thomas Seidl

Machine Learning (ML) has recently been demonstrated to rival expert-level human accuracy in prediction and detection tasks in a variety of domains, including medicine. Despite these impressive findings, however, a key barrier to the full…

Artificial Intelligence · Computer Science 2021-07-01 D. Fompeyrine , E. S. Vorm , N. Ricka , F. Rose , G. Pellegrin

Open Information Extraction (OIE) aims to extract objective structured knowledge from natural texts, which has attracted growing attention to build dedicated models with human experience. As the large language models (LLMs) have exhibited…

Computation and Language · Computer Science 2023-10-17 Ji Qi , Kaixuan Ji , Xiaozhi Wang , Jifan Yu , Kaisheng Zeng , Lei Hou , Juanzi Li , Bin Xu

In recent years, large language models (LLMs) have demonstrated remarkable potential across various medical applications. Building on this foundation, multimodal large language models (MLLMs) integrate LLMs with visual models to process…

Computation and Language · Computer Science 2025-03-11 Xiaoyi Liang , Mouxiao Bian , Moxin Chen , Lihao Liu , Junjun He , Jie Xu , Lin Li