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This article discusses how the individual morphological properties of basic objects (e.g. neurons, molecules and aggregates), jointly with their particular spatial distribution, can determine the connectivity and dynamics of systems…

Molecular Networks · Quantitative Biology 2007-05-23 Luciano da Fontoura Costa

This paper is a survey, with few proofs, of ideas and notions related to self-similarity of groups, semi-groups and their actions. It attempts to relate these concepts to more familiar ones, such as fractals, self-similar sets, and…

Group Theory · Mathematics 2009-11-29 Laurent Bartholdi , Rostislav I. Grigorchuk , Volodymyr V. Nekrashevych

We deal with the systematic development of stability for the context of approximate elementary submodels of a monster metric space, which is not far, but still very distinct from the first order case. In particular we prove the analogue of…

Logic · Mathematics 2007-05-23 Saharon Shelah , Alex Usvyatsov

In this article we introduce the space of configurations of commuting elements in a topological group and show that it satisfies rational homological stability for the sequences of unitary, special unitary and symplectic groups. We also…

Algebraic Topology · Mathematics 2022-01-11 José Cantarero , Ángel R. Jiménez

Biological systems rely on robust internal information processing: Survival depends on highly reproducible dynamics of regulatory processes. Biological information processing elements, however, are intrinsically noisy (genetic switches,…

Molecular Networks · Quantitative Biology 2009-11-10 Konstantin Klemm , Stefan Bornholdt

We propose a solitonic dynamical system over finite fields that may be regarded as an analogue of the box-ball systems. The one-soliton solutions of the system, which have nested structures similar to fractals, are also proved. The…

Exactly Solvable and Integrable Systems · Physics 2014-08-04 Fumitaka Yura

Like Life, Lenia CA support a range of patterns that move, interact with their environment, and/or are modified by said interactions. These patterns maintain a cohesive, self-organizing morphology, i.e. they exemplify autopoiesis, the…

Cellular Automata and Lattice Gases · Physics 2024-08-01 Q. Tyrell Davis

The spread of autonomous systems into safety-critical areas has increased the demand for their formal verification, not only due to stronger certification requirements but also to public uncertainty over these new technologies. However, the…

Artificial Intelligence · Computer Science 2018-04-19 Maryam Kamali , Sven Linker , Michael Fisher

Most autonomous robotic agents use logic inference to keep themselves to safe and permitted behaviour. Given a set of rules, it is important that the robot is able to establish the consistency between its rules, its perception-based…

Robotics · Computer Science 2016-11-11 Hongyang Qu , Sandor M. Veres

We developed a mechanical model of spermatozoal swimming in bulk suspensions. We traced the spatiotemporal elastohydrodynamic interactions and found that spermatozoa engaged in self-organisation: flagellar undulatory motion generated a…

Fluid Dynamics · Physics 2023-02-22 Nanami Taketoshi , Toshihiro Omori , Takuji Ishikawa

Cellular solids and micro-lattices are a class of lightweight architected materials that have been established for their unique mechanical, thermal, and acoustic properties. It has been shown that by tuning material architecture, a…

Materials Science · Physics 2024-03-12 Shengzhi Luan , Enze Chen , Joel John , Stavros Gaitanaros

This paper introduces a topological framework for interpreting the internal representations of Multilayer Perceptrons (MLPs). We construct a simplicial tower, a sequence of simplicial complexes connected by simplicial maps, that captures…

Machine Learning · Computer Science 2025-06-03 Eduardo Paluzo-Hidalgo

The spatial structure of the cell is highly organized at all levels: from small complexes and assemblies, to local nano- and micro-clusters, to global, micrometer scales across and between cells. We suggest that this multiscale spatial cell…

Biomolecules · Quantitative Biology 2013-08-06 Ruth Nussinov

This is a survey on the local structure about a fixed point of discrete finite-dimensional holomorphic dynamical systems, discussing in particular the existence of local topological conjugacies to normal forms, and the structure of local…

Dynamical Systems · Mathematics 2007-05-23 Marco Abate

This article is devoted to investigations of a structure and homomorphisms of microbundles. Microbundles are generalizations of manifolds. For manifolds it was studied when their families of homomorphism can be supplied with the manifold…

General Topology · Mathematics 2023-03-17 Sergey Victor Ludkovski

A collection of thin structures buckle, bend, and bump into each-other when confined. This contact can lead to the formation of patterns: hair will self-organize in curls; DNA strands will layer into cell nuclei; paper, when crumpled, will…

Soft Condensed Matter · Physics 2023-04-19 Arman Guerra , Anja Slim , Douglas P. Holmes , Ousmane Kodio

This paper treats the problem of the merging of formations, where the underlying model of a formation is graphical. We first analyze the rigidity and persistence of meta-formations, which are formations obtained by connecting several rigid…

Multiagent Systems · Computer Science 2007-10-16 Julien M. Hendrickx , Changbin Yu , Baris Fidan , Brian D. O. Anderson

Representation stability is a phenomenon whereby the structure of certain sequences $X_n$ of spaces can be seen to stabilize when viewed through the lens of representation theory. In this paper I describe this phenomenon and sketch a…

Geometric Topology · Mathematics 2014-04-17 Benson Farb

Structurally stable (rough) flows on surfaces have only finitely many singularities and finitely many closed orbits, all of which are hyperbolic, and they have no trajectories joining saddle points. The violation of the last property leads…

Dynamical Systems · Mathematics 2017-06-07 Vladislav Kruglov , Dmitry Malyshev , Olga Pochinka

We study $\varepsilon$-stability in continuous logic. We first consider stability in a model, where we obtain a definability of types result with a better approximation than that in the literature. We also prove forking symmetry for…

Logic · Mathematics 2024-11-08 Nicolas Chavarria