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Data representation in non-Euclidean spaces has proven effective for capturing hierarchical and complex relationships in real-world datasets. Hyperbolic spaces, in particular, provide efficient embeddings for hierarchical structures. This…

Computer Vision and Pattern Recognition · Computer Science 2024-09-27 Jacob Fein-Ashley , Ethan Feng , Minh Pham

Retrieval-augmented generation (RAG) for biomedical knowledge faces a hierarchy-aware ontology grounding challenge: resources like HPO, DO, and MeSH use deep ``is-a" taxonomies, yet production stacks rely on Euclidean embeddings and ANN…

Information Retrieval · Computer Science 2026-04-14 Ou Deng , Shoji Nishimura , Atsushi Ogihara , Qun Jin

Knowledge graph embedding (KGE) models are an effective and popular approach to represent and reason with multi-relational data. Prior studies have shown that KGE models are sensitive to hyperparameter settings, however, and that suitable…

Machine Learning · Computer Science 2022-07-12 Adrian Kochsiek , Fritz Niesel , Rainer Gemulla

Knowledge graphs (KGs), structured as multi-relational data of entities and relations, are vital for tasks like data analysis and recommendation systems. Knowledge graph completion (KGC), or link prediction, addresses incompleteness of KGs…

Machine Learning · Computer Science 2025-06-16 Huiling Zhu , Yingqi Zeng

Knowledge graphs (KGs) are important products of the semantic web, which are widely used in various application domains. Healthcare is one of such domains where KGs are intensively used, due to the high requirement for knowledge accuracy…

Artificial Intelligence · Computer Science 2025-07-31 Yuzhang Xie , Xu Han , Ran Xu , Xiao Hu , Jiaying Lu , Carl Yang

Knowledge Graphs (KGs), representing facts as triples, have been widely adopted in many applications. Reasoning tasks such as link prediction and rule induction are important for the development of KGs. Knowledge Graph Embeddings (KGEs)…

Artificial Intelligence · Computer Science 2021-12-17 Wen Zhang , Shumin Deng , Mingyang Chen , Liang Wang , Qiang Chen , Feiyu Xiong , Xiangwen Liu , Huajun Chen

Deep Learning is mostly responsible for the surge of interest in Artificial Intelligence in the last decade. So far, deep learning researchers have been particularly successful in the domain of image processing, where Convolutional Neural…

Machine Learning · Computer Science 2023-08-31 Andrii Skliar , Maurice Weiler

Knowledge graphs (KGs) have been increasingly employed for link prediction and recommendation using real-world datasets. However, the majority of current methods rely on static data, neglecting the dynamic nature and the hidden…

Artificial Intelligence · Computer Science 2024-02-20 Ruiyi Yang , Flora D. Salim , Hao Xue

Knowledge Graphs (KGs) have gained considerable attention recently from both academia and industry. In fact, incorporating graph technology and the copious of various graph datasets have led the research community to build sophisticated…

Artificial Intelligence · Computer Science 2020-06-03 Bilal Abu-Salih , Marwan Al-Tawil , Ibrahim Aljarah , Hossam Faris , Pornpit Wongthongtham

Recent papers in the graph machine learning literature have introduced a number of approaches for hyperbolic representation learning. The asserted benefits are improved performance on a variety of graph tasks, node classification and link…

Machine Learning · Computer Science 2025-02-26 Isay Katsman , Anna Gilbert

While Hyperbolic Graph Neural Network (HGNN) has recently emerged as a powerful tool dealing with hierarchical graph data, the limitations of scalability and efficiency hinder itself from generalizing to deep models. In this paper, by…

Machine Learning · Computer Science 2024-06-10 Jiaxu Liu , Xinping Yi , Sihao Wu , Xiangyu Yin , Tianle Zhang , Xiaowei Huang , Shi Jin

Finding meaningful representations and distances of hierarchical data is important in many fields. This paper presents a new method for hierarchical data embedding and distance. Our method relies on combining diffusion geometry, a central…

Machine Learning · Computer Science 2023-05-31 Ya-Wei Eileen Lin , Ronald R. Coifman , Gal Mishne , Ronen Talmon

Knowledge graphs (KGs) play a crucial role in many applications, such as question answering, but incompleteness is an urgent issue for their broad application. Much research in knowledge graph completion (KGC) has been performed to resolve…

Artificial Intelligence · Computer Science 2023-01-10 Yinyu Lan , Shizhu He , Kang Liu , Jun Zhao

Recently, hyperbolic space has risen as a promising alternative for semi-supervised graph representation learning. Many efforts have been made to design hyperbolic versions of neural network operations. However, the inspiring geometric…

Machine Learning · Computer Science 2022-01-24 Jiahong Liu , Menglin Yang , Min Zhou , Shanshan Feng , Philippe Fournier-Viger

Knowledge Graph Embedding (KGE) has proven to be an effective approach to solving the Knowledge Graph Completion (KGC) task. Relational patterns which refer to relations with specific semantics exhibiting graph patterns are an important…

Artificial Intelligence · Computer Science 2023-08-16 Long Jin , Zhen Yao , Mingyang Chen , Huajun Chen , Wen Zhang

Most real-world datasets consist of a natural hierarchy between classes or an inherent label structure that is either already available or can be constructed cheaply. However, most existing representation learning methods ignore this…

Machine Learning · Computer Science 2024-12-03 Aditya Sinha , Siqi Zeng , Makoto Yamada , Han Zhao

Knowledge Graph Embeddings (KGEs) have shown promising performance on link prediction tasks by mapping the entities and relations from a knowledge graph into a geometric space (usually a vector space). Ultimately, the plausibility of the…

Machine Learning · Computer Science 2020-10-20 Mojtaba Nayyeri , Chengjin Xu , Jens Lehmann , Sahar Vahdati

Knowledge Graph (KG) is a flexible structure that is able to describe the complex relationship between data entities. Currently, most KG embedding models are trained based on negative sampling, i.e., the model aims to maximize some…

Artificial Intelligence · Computer Science 2021-06-17 Zelong Li , Jianchao Ji , Zuohui Fu , Yingqiang Ge , Shuyuan Xu , Chong Chen , Yongfeng Zhang

Knowledge Graphs (KGs) store human knowledge in the form of entities (nodes) and relations, and are used extensively in various applications. KG embeddings are an effective approach to addressing tasks like knowledge discovery, link…

Artificial Intelligence · Computer Science 2025-02-03 Ioannis Reklos , Jacopo de Berardinis , Elena Simperl , Albert Meroño-Peñuela

Temporal link prediction, aiming to predict future edges between paired nodes in a dynamic graph, is of vital importance in diverse applications. However, existing methods are mainly built upon uniform Euclidean space, which has been found…

Machine Learning · Computer Science 2023-05-04 Qijie Bai , Changli Nie , Haiwei Zhang , Dongming Zhao , Xiaojie Yuan