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The dynamics of local cortical networks are irregular, but correlated. Dynamic excitatory--inhibitory balance is a plausible mechanism that generates such irregular activity, but it remains unclear how balance is achieved and maintained in…

Neurons and Cognition · Quantitative Biology 2020-04-28 Alan Eric Akil , Robert Rosenbaum , Krešimir Josić

The quintessential property of neuronal systems is their intensive patterns of selective synaptic connections. The current work describes a physics-based approach to neuronal shape modeling and synthesis and its consideration for the…

Neurons and Cognition · Quantitative Biology 2009-11-10 Luciano da Fontoura Costa , Regina Celia Coelho

Spatial self-similarity is a hallmark of critical phenomena. We investigate the dynamic process of percolation, in which bonds are incrementally inserted to an empty lattice until fully occupied, and track the gaps describing the changes in…

Statistical Mechanics · Physics 2024-11-08 Mingzhong Lu , Yu-Feng Song , Ming Li , Youjin Deng

Networked structures arise in a wide array of different contexts such as technological and transportation infrastructures, social phenomena, and biological systems. These highly interconnected systems have recently been the focus of a great…

Statistical Mechanics · Physics 2009-11-10 Alain Barrat , Marc Barthelemy , Romualdo Pastor-Satorras , Alessandro Vespignani

Liquid diodes are surface structures that facilitate the flow of liquids in a specific direction. When these structures are within the capillary regime, they promote liquid transport without the need for external forces. In nature, they are…

Soft Condensed Matter · Physics 2023-08-24 Camilla Sammartino , Yair Shokef , Bat-El Pinchasik

This paper studies growth, percolation, and correlations in disordered fiber networks. We start by introducing a 2D continuum deposition model with effective fiber-fiber interactions represented by a parameter $p$ which controls the degree…

Statistical Mechanics · Physics 2009-10-28 N. Provatas , M. Haataja , E. Seppälä , S. Majaniemi , J. Åström , M. Alava , T. Ala-Nissila

Experimental results for covalent glasses have highlighted the existence of a new self-organized phase due to the tendency of glass networks to minimize internal stress. Recently, we have shown that an equilibrated self-organized…

Disordered Systems and Neural Networks · Physics 2009-11-11 M. -A. Briere , M. V. Chubynsky , Normand Mousseau

Heterogeneous k-core percolation is an extension of a percolation model which has interesting applications to the resilience of networks under random damage. In this model, the notion of node robustness is local, instead of global as in…

Disordered Systems and Neural Networks · Physics 2013-03-08 Davide Cellai , James P. Gleeson

The relationship between network topology and system dynamics has significant implications for unifying our understanding of the interplay among metabolic, gene-regulatory, and ecosystem network architecures. Here we analyze the stability…

Populations and Evolution · Quantitative Biology 2015-06-17 Cameron Smith , Raymond S. Puzio , Aviv Bergman

Cells actively probe and respond to the stiffness of their surroundings. Since mechanosensory cells in connective tissue are surrounded by a disordered network of biopolymers, their in vivo mechanical environment can be extremely…

Soft Condensed Matter · Physics 2016-08-05 Farzan Beroz , Louise M. Jawerth , Stefan Münster , David A. Weitz , Chase P. Broedersz , Ned S. Wingreen

Collagen forms the structural scaffold of connective tissues in all mammals. Tissues are remarkably resistant against mechanical deformations because collagen molecules hierarchically self-assemble in fibrous networks that stiffen with…

Biopolymer networks from the intracellular to tissue scale display high rigidity and tensile stress while having coordinations well below the normal threshold for mechanical rigidity. The elastic filaments in these networks are often…

Soft Condensed Matter · Physics 2024-11-15 Marco Aurelio Galvani Cunha , John C. Crocker , Andrea J. Liu

Understanding the relationship between the microscopic structure and topology of a material and its macroscopic properties is a fundamental challenge across a wide range of systems. Here, we investigate the viscoelasticity of DNA nanostar…

Soft Condensed Matter · Physics 2025-02-03 Giorgia Palombo , Simon Weir , Davide Michieletto , Yair Augusto Gutierrez Fosado

Reinforced elastic sheets surround us in daily life, from concrete shell buildings to biological structures such as the arthropod exoskeleton or the venation network of dicotyledonous plant leaves. Natural structures are often highly…

Biological Physics · Physics 2021-01-27 Henrik Ronellenfitsch

We introduce a mathematical model for the mechanical behaviour of the eukaryotic cell cytoskeleton. This discrete model involves a regular array of pre-stressed protein filaments that exhibit resistance to enthalpic stretching, joined at…

Quantitative Methods · Quantitative Biology 2023-09-06 J. Köry , N. A. Hill , X. Y. Luo , P. S. Stewart

Dense granular materials and other particle aggregates transmit stress in a manner that belies their microstructural disorder. A subset of the particle contact network is strikingly coherent, wherein contacts are aligned nearly linearly and…

Soft Condensed Matter · Physics 2020-05-20 K. P. Krishnaraj , Prabhu R Nott

The problem of continuum percolation in dispersions of rods is reformulated in terms of weighted random geometric graphs. Nodes (or sites or vertices) in the graph represent spatial locations occupied by the centers of the rods. The…

Statistical Mechanics · Physics 2015-09-30 Avik P. Chatterjee , Claudio Grimaldi

We use a biophysical model of a local neuronal circuit to study the implications of synaptic plasticity for the detection of weak sensory stimuli. Networks with fast plastic coupling show behavior consistent with stochastic resonance.…

Neurons and Cognition · Quantitative Biology 2009-11-13 Vladislav Volman , Herbert Levine

Percolation theory has been largely used in the study of structural properties of complex networks such as the robustness, with remarkable results. Nevertheless, a purely topological description is not sufficient for a correct…

Statistical Mechanics · Physics 2016-08-31 Luca Dall'Asta

In a Monte Carlo study the conductivity of two-dimensional random stick systems is investigated from the percolation threshold up to ten times the percolation threshold density. We propose a model explicitly depending on the stick density…

Disordered Systems and Neural Networks · Physics 2012-10-10 Milan Žeželj , Igor Stanković
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