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Dense granular systems subjected to an imposed shear stress undergo stick-slip dynamics with systematic patterns of dilation-compaction. During each stick phase, as the frictional strength builds up, the granular system dilates to…

Soft Condensed Matter · Physics 2021-02-04 Omid Dorostkar , Karen E. Daniels , Dominik Strebel , Jan Carmeliet

Network remodeling, or adaptation, in the presence of periodically driven forcings has hereto remained largely unexplored, despite the fact that a broad class of biological transport networks, e.g. animal vasculature, depends on periodic…

Adaptation and Self-Organizing Systems · Physics 2026-01-01 Purba Chatterjee , Eleni Katifori

We study neural connectivity in cultures of rat hippocampal neurons. We measure the neurons' response to an electric stimulation for gradual lower connectivity, and characterize the size of the giant cluster in the network. The connectivity…

Neurons and Cognition · Quantitative Biology 2010-07-30 Jordi Soriano , Ilan Breskin , Elisha Moses , Tsvi Tlusty

The synaptic connectivity of cortical networks features an overrepresentation of certain wiring motifs compared to simple random-network models. This structure is shaped, in part, by synaptic plasticity that promotes or suppresses…

Neurons and Cognition · Quantitative Biology 2014-12-23 Gabriel Koch Ocker , Ashok Litwin-Kumar , Brent Doiron

In development and homeostasis, multi-cellular systems exhibit spatial and temporal heterogeneity in their biochemical and mechanical properties. Nevertheless, it remains unclear how spatiotemporally heterogeneous forces affect the…

Soft Condensed Matter · Physics 2022-02-18 Takaki Yamamoto , Daniel M. Sussman , Tatsuo Shibata , M. Lisa Manning

We consider the slow and athermal deformations of amorphous solids and show how the ensuing sequence of discrete plastic rearrangements can be mapped onto a directed network. The network topology reveals a set of highly connected regions…

Soft Condensed Matter · Physics 2019-11-06 Muhittin Mungan , Srikanth Sastry , Karin Dahmen , Ido Regev

We study how network structure affects the dynamics of collateral in presence of rehypothecation. We build a simple model wherein banks interact via chains of repo contracts and use their proprietary collateral or re-use the collateral…

Risk Management · Quantitative Finance 2018-02-07 Duc Thi Luu , Mauro Napoletano , Paolo Barucca , Stefano Battiston

Rigidity Percolation is studied analytically on randomly bonded networks with two types of nodes, respectively with coordination numbers $z_1$ and $z_2$, and with $g_1$ and $g_2$ degrees of freedom each. For certain cases that model…

Disordered Systems and Neural Networks · Physics 2015-06-17 Cristian F. Moukarzel

Biological systems (among others) may respond to a large variety of distinct external stimuli, or signals. These perturbations will generally be presented to the system not singly, but in various combinations, so that a proper understanding…

Quantitative Methods · Quantitative Biology 2011-06-24 Dennis Wylie

We summarize ideas and methods that apply to rigidity and connectivity percolation. These include: constraint counting concepts, exact calculations on diluted trees and numerical results on diluted lattices using matching algorithms. The…

Statistical Mechanics · Physics 2007-05-23 Cristian F. Moukarzel , Phillip M. Duxbury

Higher order interactions are increasingly recognised as a fundamental aspect of complex systems ranging from the brain to social contact networks. Hypergraph as well as simplicial complexes capture the higher-order interactions of complex…

Physics and Society · Physics 2021-09-23 Hanlin Sun , Ginestra Bianconi

Percolation, the formation of a macroscopic connected component, is a key feature in the description of complex networks. The dynamical properties of a variety of systems can be understood in terms of percolation, including the robustness…

Statistical Mechanics · Physics 2013-06-24 Shane Squires , Katherine Sytwu , Diego Alcala , Thomas Antonsen , Edward Ott , Michelle Girvan

The elasticity of disordered and polydisperse polymer networks is a fundamental problem of soft matter physics that is still open. Here, we self-assemble polymer networks via simulations of a mixture of bivalent and tri- or tetravalent…

We investigate dynamical heterogeneities in the collective relaxation of a concentrated microgel system, for which the packing fraction can be conveniently varied by changing the temperature. The packing fraction dependent mechanical…

Soft Condensed Matter · Physics 2011-05-31 David A. Sessoms , Irmgard Bischofberger , Luca Cipelletti , Véronique Trappe

The interstellar medium is characterised by an intricate filamentary network which exhibits complex structures. These show a variety of different shapes (e.g. junctions, rings, etc.) deviating strongly from the usually assumed cylindrical…

Astrophysics of Galaxies · Physics 2021-07-14 Elena Hoemann , Stefan Heigl , Andreas Burkert

We evaluate the percolation threshold values for a realistic model of continuum segregated systems, where random spherical inclusions forbid the percolating objects, modellized by hard-core spherical particles surrounded by penetrable…

Disordered Systems and Neural Networks · Physics 2009-11-13 N. Johner , C. Grimaldi , T. Maeder , P. Ryser

It was recently found that cascading failures can cause the abrupt breakdown of a system of interdependent networks. Using the percolation method developed for single clustered networks by Newman [Phys. Rev. Lett. {\bf 103}, 058701 (2009)],…

Physics and Society · Physics 2013-03-11 Xuqing Huang , Shuai Shao , Huijuan Wang , Sergey V. Buldyrev , Shlomo Havlin , H. Eugene Stanley

Percolation theory characterizing the robustness of a network has applications ranging from biology, to epidemic spreading, and complex infrastructures. Percolation theory, however, only concern the typical response of a infinite network to…

Disordered Systems and Neural Networks · Physics 2018-02-28 Ginestra Bianconi

We present theoretical and experimental studies of the elastic response of fibrous networks subjected to uniaxial strain. Uniaxial compression or extension is applied to extracellular networks of fibrin and collagen using a shear rheometer…

Collective cell motions underlie structure formation during embryonic development. Tissues exhibit emergent multicellular characteristics such as jamming, rigidity transitions, and glassy dynamics, but there remain questions about how those…

Biological Physics · Physics 2023-12-13 Evan Thomas , Sevan Hopyan
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