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Clinical notes hold rich yet unstructured details about diagnoses, treatments, and outcomes that are vital to precision medicine but hard to exploit at scale. We introduce a method that represents each patient as a matrix built from…

Machine Learning · Computer Science 2026-01-13 Petr Zelina , Marko Řeháček , Jana Halámková , Lucia Bohovicová , Martin Rusinko , Vít Nováček

Recent advances in Big Data has prompted health care practitioners to utilize the data available on social media to discern sentiment and emotions expression. Health Informatics and Clinical Analytics depend heavily on information gathered…

Computation and Language · Computer Science 2019-02-05 Adil Rajput

Accurate mortality prediction allows Intensive Care Units (ICUs) to adequately benchmark clinical practice and identify patients with unexpected outcomes. Traditionally, simple statistical models have been used to assess patient death risk,…

Machine Learning · Computer Science 2020-05-20 William Caicedo-Torres , Jairo Gutierrez

In recent years, word embeddings have been surprisingly effective at capturing intuitive characteristics of the words they represent. These vectors achieve the best results when training corpora are extremely large, sometimes billions of…

Computation and Language · Computer Science 2017-12-06 Willie Boag , Hassan Kané

Large scale veterinary clinical records can become a powerful resource for patient care and research. However, clinicians lack the time and resource to annotate patient records with standard medical diagnostic codes and most veterinary…

Computation and Language · Computer Science 2018-09-05 Allen Nie , Ashley Zehnder , Rodney L. Page , Arturo L. Pineda , Manuel A. Rivas , Carlos D. Bustamante , James Zou

Natural Language Processing (NLP) is an essential subset of artificial intelligence. It has become effective in several domains, such as healthcare, finance, and media, to identify perceptions, opinions, and misuse, among others. Privacy is…

Computation and Language · Computer Science 2025-01-20 Andrick Adhikari , Sanchari Das , Rinku Dewri

Objective: The majority of detailed patient information in real-world data (RWD) is only consistently available in free-text clinical documents. Manual curation is expensive and time-consuming. Developing natural language processing (NLP)…

Clinical notes recorded during a patient's perioperative journey holds immense informational value. Advances in large language models (LLMs) offer opportunities for bridging this gap. Using 84,875 pre-operative notes and its associated…

Computation and Language · Computer Science 2025-04-03 Charles Alba , Bing Xue , Joanna Abraham , Thomas Kannampallil , Chenyang Lu

Modern organizations struggle with insurmountable number of vulnerabilities that are discovered and reported by their network and application vulnerability scanners. Therefore, prioritization and focus become critical, to spend their…

Cryptography and Security · Computer Science 2022-06-23 Constantin Adam , Muhammed Fatih Bulut , Daby Sow , Steven Ocepek , Chris Bedell , Lilian Ngweta

This technical report introduces a Named Clinical Entity Recognition Benchmark for evaluating language models in healthcare, addressing the crucial natural language processing (NLP) task of extracting structured information from clinical…

Large language models (LLMs) have immense potential to make information more accessible, particularly in medicine, where complex medical jargon can hinder patient comprehension of clinical notes. We developed a patient-facing tool using…

Deep learning models often achieve expert-level accuracy in medical image classification but suffer from a critical flaw: semantic incoherence. These high-confidence mistakes that are semantically incoherent (e.g., classifying a malignant…

Computer Vision and Pattern Recognition · Computer Science 2026-04-15 Abolfazl Mohammadi-Seif , Ricardo Baeza-Yates

Of the 2652 articles considered, 106 met the inclusion criteria. Review of the included papers resulted in identification of 43 chronic diseases, which were then further classified into 10 disease categories using ICD-10. The majority of…

Computers and Society · Computer Science 2019-08-19 Seyedmostafa Sheikhalishahi , Riccardo Miotto , Joel T Dudley , Alberto Lavelli , Fabio Rinaldi , Venet Osmani

As patients' access to their doctors' clinical notes becomes common, translating professional, clinical jargon to layperson-understandable language is essential to improve patient-clinician communication. Such translation yields better…

Computation and Language · Computer Science 2019-05-28 Wei-Hung Weng , Yu-An Chung , Peter Szolovits

As the performance of large language models (LLMs) continues to advance, their adoption in the medical domain is increasing. However, most existing risk evaluations largely focused on general safety benchmarks. In the medical applications,…

Computation and Language · Computer Science 2026-01-12 Jean-Philippe Corbeil , Minseon Kim , Maxime Griot , Sheela Agarwal , Alessandro Sordoni , Francois Beaulieu , Paul Vozila

Objective: Electronic health records (EHR) represent a rich resource for conducting observational studies, supporting clinical trials, and more. However, much of the relevant information is stored in an unstructured format that makes it…

Monitoring the health status of patients in the Intensive Care Unit (ICU) is a critical aspect of providing superior care and treatment. The availability of large-scale electronic health records (EHR) provides machine learning models with…

Artificial Intelligence · Computer Science 2023-05-05 Jun Wu , Xuesong Ye , Chengjie Mou , Weinan Dai

Despite the advances in digital healthcare systems offering curated structured knowledge, much of the critical information still lies in large volumes of unlabeled and unstructured clinical texts. These texts, which often contain protected…

Electronic health records (EHRs) store an extensive array of patient information, encompassing medical histories, diagnoses, treatments, and test outcomes. These records are crucial for enabling healthcare providers to make well-informed…

Computation and Language · Computer Science 2023-08-07 Yu-Neng Chuang , Ruixiang Tang , Xiaoqian Jiang , Xia Hu

Integrating language models (LMs) in healthcare systems holds great promise for improving medical workflows and decision-making. However, a critical barrier to their real-world adoption is the lack of reliable evaluation of their…

Computation and Language · Computer Science 2025-12-15 Akash Ghosh , Srivarshinee Sridhar , Raghav Kaushik Ravi , Muhsin Muhsin , Sriparna Saha , Chirag Agarwal