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In this thesis we aim to analyze and quantify the energetic and information contents that can be extracted from a dynamical system subject to the external environment. The latter is usually assumed to be deleterious for the feasibility of…

Quantum Physics · Physics 2018-05-07 Stefano Gherardini

We report relationships between the effects of noise and applied constant currents on the behavior of a system of excitable elements. The analytical approach based on the nonlinear Fokker-Planck equation of a mean-field model allows us to…

Disordered Systems and Neural Networks · Physics 2011-01-04 K. Okumura , M. Shiino

Recurrently coupled oscillators that are sufficiently heterogeneous and/or randomly coupled can show an asynchronous activity in which there are no significant correlations among the units of the network. The asynchronous state can…

Neurons and Cognition · Quantitative Biology 2023-05-03 Jonas Ranft , Benjamin Lindner

Networks of interacting, communicating subsystems are common in many fields, from ecology, biology, epidemiology to engineering and robotics. In the presence of noise and uncertainty, inter- actions between the individual components can…

Statistical Mechanics · Physics 2017-11-01 Ira B. Schwartz , Klimka Szwaykowska , Thomas W. Carr

We explore the impact of social noise, characterized by nonconformist behavior, on the phase transition within the framework of the majority rule model. The order-disorder transition can reflect the consensus-polarization state in a social…

Physics and Society · Physics 2024-11-14 Roni Muslim , Didi Ahmad Mulya , Zulkaida Akbar , Rinto Anugraha NQZ

Understanding cell function requires an accurate description of how noise is transmitted through biochemical networks. We present an analytical result for the power spectrum of the output signal of a biochemical network that takes into…

Molecular Networks · Quantitative Biology 2009-11-11 Sorin Tanase-Nicola , Patrick B. Warren , Pieter Rein ten Wolde

We investigate the role of connection density in an adaptive network model of chaotic units that dynamically rewire based on their internal states and local coherence. By systematically varying the network's connectivity density, we uncover…

Adaptation and Self-Organizing Systems · Physics 2025-08-19 Ramiro Plüss , Pablo Martín Gleiser

We study numerically the variability of the outbreak of diseases on complex networks. We use a SI model to simulate the disease spreading at short times, in homogeneous and in scale-free networks. In both cases, we study the effect of…

Statistical Mechanics · Physics 2007-05-23 Pascal Crépey , Fabián P. Alvarez , Marc Barthélemy

Cortical circuits exhibit high levels of response diversity, even across apparently uniform neuronal populations. While emerging data-driven approaches exploit this heterogeneity to infer effective models of cortical circuit computation…

Neurons and Cognition · Quantitative Biology 2025-11-06 Mohammadreza Soltanipour , Stefan Treue , Fred Wolf

Cellular decision making is based on regulatory circuits that associate signal thresholds to specific physiological actions. This transmission of information is subjected to molecular noise what can decrease its fidelity. Here, we show…

Molecular Networks · Quantitative Biology 2017-02-08 Guillermo Rodrigo , Juan F. Poyatos

Problems with artificial neural networks originate from their deterministic nature and inevitable prior learnings, resulting in inadequate adaptability against unpredictable, abrupt environmental change. Here we show that a stochastically…

Disordered Systems and Neural Networks · Physics 2009-11-13 Naoki Asakawa , Yasushi Hotta , Teruo Kanki , Hitoshi Tabata , Tomoji Kawai

Neurons in the central nervous system are affected by complex and noisy signals due to fluctuations in their cellular environment and in the inputs they receive from many other cells 1,2. Such noise usually increases the probability that a…

Neurons and Cognition · Quantitative Biology 2008-05-06 Boris S. Gutkin , Juergen Jost , Henry C. Tuckwell

We examine traveling-wave solutions on a regular ring network with one additional long-range link that spans a distance d. The nodes obey the FitzHugh-Nagumo kinetics in the excitable regime. The additional shortcut induces a plethora of…

Adaptation and Self-Organizing Systems · Physics 2015-06-23 Thomas Isele , Benedikt Hartung , Philipp Hövel , Eckehard Schöll

Changes in a cell's external or internal conditions are usually reflected in the concentrations of the relevant transcription factors. These proteins in turn modulate the expression levels of the genes under their control and sometimes need…

Molecular Networks · Quantitative Biology 2013-08-01 Gasper Tkacik , Curtis G Callan , William Bialek

Intracellular fluctuations, mainly triggered by gene expression, are an inevitable phenomenon observed in living cells. It influences generation of phenotypic diversity in genetically identical cells. Such variation of cellular components…

Molecular Networks · Quantitative Biology 2017-02-08 Alok Kumar Maity , Pinaki Chaudhury , Suman K. Banik

We have studied the synchronization in finite $N$-unit FitzHugh-Nagumo neuron ensembles subjected to additive and multiplicative noises, by using the augmented moment method (AMM) which is reformulated with the use of the Fokker-Planck…

Disordered Systems and Neural Networks · Physics 2007-05-23 Hideo Hasegawa

Excitable media are ubiquitous in nature, and in such systems the local excitation tends to self-organize in traveling waves, or in rotating spiral-shaped patterns in two or three spatial dimensions. Examples include waves during a pandemic…

Dynamical Systems · Mathematics 2023-12-25 Marie Cloet , Louise Arno , Desmond Kabus , Joeri Van der Veken , Alexander V. Panfilov , Hans Dierckx

From the flashes of fireflies to Josephson junctions and power infrastructure, networks of coupled phase oscillators provide a powerful framework to describe synchronization phenomena in many natural and engineered systems. Most real-world…

Adaptation and Self-Organizing Systems · Physics 2022-03-02 Sherwood Martineau , Tim Saffold , Timothy T. Chang , Henrik Ronellenfitsch

Cell systems consist of a huge number of various molecules that display specific patterns of interactions, which have a determining influence on the cell's functioning. In general, such complexity is seen to increase with the complexity of…

Biomolecules · Quantitative Biology 2014-03-14 Marianne Rooman , Jaroslav Albert , Mitia Duerinckx

Recent experiments suggest that inhibitory networks of interneurons can synchronize the neuronal discharge in in vitro hippocampal slices. Subsequent theoretical work has shown that strong synchronization by mutual inhibition is only…

Statistical Mechanics · Physics 2007-05-23 P. H. E Tiesinga , Jorge V Jose
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