Related papers: Slender body theories for rotating filaments
Proteins can combine into functional elements in living cells or self-assemble into unwanted structures in a number of diseases. The resulting aggregates often display filamentous morphologies across a large range of protein shapes and…
Using the method of asymptotic splittings, the possible singularity structures and the corresponding asymptotic behavior of a 3-brane in a five-dimensional bulk are classified, in the case where the bulk field content is parametrized by an…
We propose a nonlinear extension of the standard tube model for semidilute solutions of freely-sliding semiflexible polymers. Non-affine filament deformations at the entanglement scale, the renormalisation of direct interactions by thermal…
A simple rearrangement of the torque free motion Hamiltonian shapes it as a perturbation problem for bodies rotating close to the principal axis of maximum inertia, independently of their triaxiality. The complete reduction of the main part…
The singularity structure and the corresponding asymptotic behavior of a 3-brane coupled to a scalar field or to a perfect fluid in a five-dimensional bulk is analyzed in full generality using the method of asymptotic splittings. In the…
Intracellular phagosomes have a lipid bilayer encapsulated fluidic shell outside the particle, on the outer side of which, molecular motors are attached. An optically trapped spherical birefringent particle phagosome provides an ideal…
Slender structures are ubiquitous in biological and physical systems, from bacterial flagella to soft robotic arms. The Cosserat rod provides a mathematical framework for slender bodies that can stretch, shear, twist and bend. In viscous…
The immersed boundary method is a numerical and mathematical formulation for solving fluid-structure interaction problems. It relies on solving fluid equations on an Eulerian fluid grid and interpolating the resulting velocity back onto…
In earlier works on Shape Dynamics (SD), a linear method of solving a particular set of Lichnerowicz-type equations through the implicit function theorem was developed in order to implicitly construct SD's global Hamiltonian and eliminate…
We systematically explore the self-assembly of semi-flexible polymers in deformable spherical confinement across a wide regime of chain stiffness, contour lengths and packing fractions by means of coarse-grained molecular dynamics…
The Green's function of the incompressible Stokes equations, the stokeslet, represents the singular flow due to a point force. Its classical value in an unbounded fluid has been extended near surfaces of various shapes, including flat walls…
We show that a smooth 1-parameter family of foliations by circles of a closed 3-manifold, deforming the foliation whose leaves are the fibers of a circle bundle, is trivial, i.e. all the foliations of the family arise from circle bundles…
The paper concerns a simple model of bicycle kinematics: a bicycle is represented by an oriented segment of constant length in n-dimensional space that can move in such a way that the velocity of its rear end is aligned with the segment…
The shape assumed by a slender elastic structure is a function both of the geometry of the space in which it exists and the forces it experiences. We explore by experiments and theoretical analysis, the morphological phase-space of a…
Many microorganisms swim in a highly heterogeneous environment with obstacles such as fibers or polymers. To better understand how this environment affects microorganism swimming, we study propulsion of a cylinder or filament in a fluid…
We present an asymptotic theory for solving the dynamics of slender autophoretic loops and knots. Our formulation is valid for non-intersecting 3D centrelines, with arbitrary chemical patterning and varying (circular) cross-sectional…
In this paper, we analyze the inverse dynamics and control of a bacteria-inspired uniflagellar robot in a fluid medium at low Reynolds number. Inspired by the mechanism behind the locomotion of flagellated bacteria, we consider a robot…
Bundles of stiff filaments are ubiquitous in the living world, found both in the cytoskeleton and in the extracellular medium. These bundles are typically held together by smaller cross-linking molecules. We demonstrate analytically,…
The actin cytoskeleton of adherent tissue cells often condenses into filament bundles contracted by myosin motors, so-called stress fibers, which play a crucial role in the mechanical interaction of cells with their environment. Stress…
Motivated to understand the behavior of biological filaments interacting with membranes of various types, we study a theoretical model for the shape and thermodynamics of intrinsically-helical filaments bound to curved membranes. We show…