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Unsupervised clustering algorithm can effectively reduce the dimension of high-dimensional unlabeled data, thus reducing the time and space complexity of data processing. However, the traditional clustering algorithm needs to set the upper…

Machine Learning · Computer Science 2022-01-17 Zecang Gu , Xiaoqi Sun , Yuan Sun , Fuquan Zhang

Principal component analysis (PCA) is a commonly used pattern analysis method that maps high-dimensional data into a lower-dimensional space maximizing the data variance, that results in the promotion of separability of data. Inspired by…

Signal Processing · Electrical Eng. & Systems 2022-06-20 Xiaoqiang Hua , Yusuke Ono , Linyu Peng , Yuting Xu

Coarse-grained (CG) modeling simplifies molecular systems by mapping groups of atoms into representative units. However, traditional CG approaches rely on fixed mapping rules, which limit their ability to handle diverse chemical systems and…

Computational Physics · Physics 2025-09-26 Zhixuan Zhong , Linbo Ma , Jian Jiang

In this article we propose and validate an unsupervised probabilistic model, Gaussian Latent Dirichlet Allocation (GLDA), for the problem of discrete state discovery from repeated, multivariate psychophysiological samples collected from…

Machine Learning · Computer Science 2022-06-30 Congyu Wu , Aaron Fisher , David Schnyer

In this study, we employ the recently developed recurrence microstate probabilities as features to improve accuracy of several well-established machine learning (ML) algorithms. These algorithms are applied to classify discrete and…

Chaotic Dynamics · Physics 2025-12-15 J. V. M. Silveira , H. C. Costa , G. S. Spezzatto , T. L. Prado , S. R. Lopes

We give an efficient algorithm for robustly clustering of a mixture of two arbitrary Gaussians, a central open problem in the theory of computationally efficient robust estimation, assuming only that the the means of the component Gaussians…

Data Structures and Algorithms · Computer Science 2020-06-02 He Jia , Santosh Vempala

The patterns of particulate matter with diameters that are generally 2.5 micrometers and smaller (PM2.5) are heterogeneous in China nationwide but can be homogeneous region-wide. To reduce the adverse effects from PM2.5, policymakers need…

Applications · Statistics 2023-11-07 Tingyin Wang , Xueqin Wang , Xiaobo Guo , Heping Zhang

This paper examines in detail the geometric structure of principal component analysis (PCA) by considering in detail the distributions of both unrotated and rotated MNIST digits in the space defined by the lowest order PCA components. Since…

Machine Learning · Computer Science 2025-10-02 David Yevick , Karolina Hutchison

Principal component analysis (PCA) is a widespread technique for data analysis that relies on the covariance-correlation matrix of the analyzed data. However to properly work with high-dimensional data, PCA poses severe mathematical…

Quantitative Methods · Quantitative Biology 2018-10-18 Luigi Leonardo Palese

Recent studies increasingly adopt simulation-based machine learning (ML) models to analyze critical infrastructure system resilience. For realistic applications, these ML models consider the component-level characteristics that influence…

Machine Learning · Computer Science 2022-05-09 Srijith Balakrishnan , Beatrice Cassottana , Arun Verma

Most masked point cloud modeling (MPM) methods follow a regression paradigm to reconstruct the coordinate or feature of masked regions. However, they tend to over-constrain the model to learn the details of the masked region, resulting in…

Computer Vision and Pattern Recognition · Computer Science 2025-07-09 Abiao Li , Chenlei Lv , Yuming Fang , Yifan Zuo , Jian Zhang , Guofeng Mei

We consider the problem of analyzing the heterogeneity of clustering distributions for multiple groups of observed data, each of which is indexed by a covariate value, and inferring global clusters arising from observations aggregated over…

Methodology · Statistics 2012-12-06 XuanLong Nguyen

There is intense interest in uncovering design rules that govern the formation of various structural phases as a function of chemical composition in multi-principal element alloys (MPEAs). In this paper, we develop a machine learning (ML)…

Materials Science · Physics 2022-06-22 Kyungtae Lee , Mukil Ayyasamy , Paige Delsa , Timothy Q. Hartnett , Prasanna V. Balachandran

We present a detailed description of the generalized geometric cluster algorithm for the efficient simulation of continuum fluids. The connection with well-known cluster algorithms for lattice spin models is discussed, and an explicit full…

Statistical Mechanics · Physics 2009-11-11 Jiwen Liu , Erik Luijten

We discuss a new Monte Carlo algorithm for the simulation of complex fluids. This algorithm employs geometric operations to identify clusters of particles that can be moved in a rejection-free way. It is demonstrated that this geometric…

Statistical Mechanics · Physics 2015-06-25 Erik Luijten , Jiwen Liu

In this paper, we consider feature screening for ultrahigh dimensional clustering analyses. Based on the observation that the marginal distribution of any given feature is a mixture of its conditional distributions in different clusters, we…

Methodology · Statistics 2024-02-05 Changhu Wang , Zihao Chen , Ruibin Xi

Finding proper collective variables for complex systems and processes is one of the most challenging tasks in simulations, which limits the interpretation of experimental and simulated data and the application of enhanced sampling…

Cluster analysis of biological samples using gene expression measurements is a common task which aids the discovery of heterogeneous biological sub-populations having distinct mRNA profiles. Several model-based clustering algorithms have…

Methodology · Statistics 2012-01-30 Alberto Cozzini , Ajay Jasra , Giovanni Montana

The expansiveness of compositional phase space is too vast to fully search using current theoretical tools for many emergent problems in condensed matter physics. The reliance on a deep chemical understanding is one method to identify local…

Superconductivity · Physics 2023-01-26 Lazar Novakovic , Ashkan Salamat , Keith V. Lawler

Crowd counting models in highly congested areas confront two main challenges: weak localization ability and difficulty in differentiating between foreground and background, leading to inaccurate estimations. The reason is that objects in…

Computer Vision and Pattern Recognition · Computer Science 2024-06-19 Yuehai Chen , Qingzhong Wang , Jing Yang , Badong Chen , Haoyi Xiong , Shaoyi Du