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In many areas such as computational biology, finance or social sciences, knowledge of an underlying graph explaining the interactions between agents is of paramount importance but still challenging. Considering that these interactions may…

Signal Processing · Electrical Eng. & Systems 2021-04-29 Mircea Moscu , Ricardo A. Borsoi , Cédric Richard , José-Carlos M. Bermudez

Most complex systems can be captured by graphs or networks. Networks connect nodes (e.g.\ neurons) through edges (synapses), thus summarizing the system's structure. A popular way of interrogating graphs is community detection, which…

Physics and Society · Physics 2024-09-23 Luis F Seoane

Topological techniques have become a popular tool for studying information flows in neural networks. In particular, simplicial homology theory is used to analyze how cognitive representations of space emerge from large conglomerates of…

Neurons and Cognition · Quantitative Biology 2025-02-19 Andrey Babichev , Vladimir Vashin , Yuri Dabaghian

We introduce $k$-robust clique complexes, a family of simplicial complexes that generalizes the traditional clique complex. Here, a subset of vertices forms a simplex provided it does not contain an independent set of size $k$. We…

Combinatorics · Mathematics 2026-04-02 Marek Filakovský

Flip graphs of combinatorial and geometric objects are at the heart of many deep structural insights and connections between different branches of discrete mathematics and computer science. They also provide a natural framework for the…

Topology identification and inference of processes evolving over graphs arise in timely applications involving brain, transportation, financial, power, as well as social and information networks. This chapter provides an overview of graph…

Signal Processing · Electrical Eng. & Systems 2025-12-12 Gonzalo Mateos , Yanning Shen , Georgios B. Giannakis , Ananthram Swami

The paper establishes an equivalence between directed homotopy categories of (diagrams of) cubical sets and (diagrams of) directed topological spaces. This equivalence both lifts and extends an equivalence between classical homotopy…

Algebraic Topology · Mathematics 2026-02-02 Sanjeevi Krishnan

Neural networks are often represented as graphs of connections between neurons. However, despite their wide use, there is currently little understanding of the relationship between the graph structure of the neural network and its…

Machine Learning · Computer Science 2020-08-28 Jiaxuan You , Jure Leskovec , Kaiming He , Saining Xie

Complex networks are graphs representing real-life systems that exhibit unique characteristics not found in purely regular or completely random graphs. The study of such systems is vital but challenging due to the complexity of the…

Social and Information Networks · Computer Science 2022-07-18 Hafida Benhidour , Lama Almeshkhas , Said Kerrache

In this paper we explore mathematical tools that can be used to relate directed and undirected random graph models to each other. We identify probability spaces on which a directed and an undirected graph model are equivalent, and…

Probability · Mathematics 2025-03-03 Mike van Santvoort , Pim van der Hoorn

In this paper, we consider the problem of reconstructing a directed graph using path queries. In this query model of learning, a graph is hidden from the learner, and the learner can access information about it with path queries. For a…

Data Structures and Algorithms · Computer Science 2021-03-17 Mano Vikash Janardhanan , Lev Reyzin

Our goal is to infer the topology of a network when (i) we can send probes between sources and receivers at the edge of the network and (ii) intermediate nodes can perform simple network coding operations, i.e., additions. Our key intuition…

Networking and Internet Architecture · Computer Science 2013-02-07 Pegah Sattari , Christina Fragouli , Athina Markopoulou

Discrete curvatures are quantities associated to the nodes and edges of a graph that reflect the local geometry around them. These curvatures have a rich mathematical theory and they have recently found success as a tool to analyze networks…

Physics and Society · Physics 2024-08-02 Michelle Roost , Karel Devriendt , Giulio Zucal , Jürgen Jost

We construct and study a class of algebras associated to generalized layered graphs, i.e. directed graphs with a ranking function on their vertices. Each finite directed acyclic graph admits countably many structures of a generalized…

Combinatorics · Mathematics 2008-06-11 Vladimir Retakh , Robert Lee Wilson

First-order logic is known to have limited expressive power over finite structures. It enjoys in particular the locality property, which states that first-order formulae cannot have a global view of a structure. This limitation ensures on…

Logic in Computer Science · Computer Science 2009-04-14 Stephane Grumbach , Zhilin Wu

We establish a new theory which gives a unified topological approach to data science, by being applicable both to point cloud data and to graph data, including networks beyond pairwise interactions. We generalize simplicial complexes and…

Algebraic Topology · Mathematics 2021-04-01 Jelena Grbić , Jie Wu , Kelin Xia , Guo-Wei Wei

Simplicial complexes are gaining increasing scientific attention as they are generalized network structures that can represent the many-body interactions existing in complex systems raging from the brain to high-order social networks.…

Disordered Systems and Neural Networks · Physics 2020-07-15 Hanlin Sun , Robert M. Ziff , Ginestra Bianconi

We study the automorphism groups of countable homogeneous directed graphs (and some additional homogeneous structures) from the point of view of topological dynamics. We determine precisely which of these automorphism groups are amenable…

Combinatorics · Mathematics 2017-12-29 Micheal Pawliuk , Miodrag Sokic

The paper studies the connectivity properties of facet graphs of simplicial complexes of combinatorial interest. In particular, it is shown that the facet graphs of $d$-cycles, $d$-hypertrees and $d$-hypercuts are, respectively, $(d+1)$,…

Combinatorics · Mathematics 2015-02-10 Ilan I. Newman , Yuri Rabinovich

We investigate connections between the symmetries (automorphisms) of a graph and its spectral properties. Whenever a graph has a symmetry, i.e. a nontrivial automorphism $\phi$, it is possible to use $\phi$ to decompose any matrix…

Combinatorics · Mathematics 2016-10-07 Wayne Barrett , Amanda Francis , Ben Webb
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