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For a positive integer $r$, a distance-$r$ independent set in an undirected graph $G$ is a set $I\subseteq V(G)$ of vertices pairwise at distance greater than $r$, while a distance-$r$ dominating set is a set $D\subseteq V(G)$ such that…

Discrete Mathematics · Computer Science 2020-12-25 Michał Pilipczuk , Sebastian Siebertz

The simple greedy algorithm to find a maximal independent set of a graph can be viewed as a sequential update of a Boolean network, where the update function at each vertex is the conjunction of all the negated variables in its…

Discrete Mathematics · Computer Science 2023-07-12 Maximilien Gadouleau , David C. Kutner

In Directed Feeback Arc Set (DFAS) we search for a set of at most $k$ arcs which intersect every cycle in the input digraph. It is a well-known open problem in parameterized complexity to decide if DFAS admits a kernel of polynomial size.…

Data Structures and Algorithms · Computer Science 2020-09-29 Marcelo Garlet Milani

Kernelization algorithms are polynomial-time reductions from a problem to itself that guarantee their output to have a size not exceeding some bound. For example, d-Set Matching for integers d>2 is the problem of finding a matching of size…

Data Structures and Algorithms · Computer Science 2018-12-10 Holger Dell , Dániel Marx

In 2018, Bai, Fujita and Zhang (\emph{Discrete Math.} 2018, 341(6): 1523-1533) introduced the concept of a kernel by rainbow paths (for short, RP-kernel) of an arc-coloured digraph $D$, which is a subset $S$ of vertices of $D$ such that…

Combinatorics · Mathematics 2018-07-24 Ruijuan Li , Yanqin Cao

Let $D$ be a digraph. We call a subset $N$ of $V(D)$ $k$-independent if for every pair of vertices $u,v \in N$, $d(u,v) \geq k$; and we call it $\ell$-absorbent if for every vertex $u \in V(D) \setminus N$, there exists $v \in N$ such that…

Combinatorics · Mathematics 2019-12-24 Alonso Ali , Orlando Lee

Any directed graph $D=(V(D),A(D))$ in this work is assumed to be finite and without self-loops. A source in a directed graph is a vertex having at least one ingoing arc. A quasi-kernel $Q\subseteq V(D)$ is an independent set in $D$ such…

Combinatorics · Mathematics 2022-12-27 Allan van Hulst

The Weisfeiler-Lehman graph kernels are among the most prevalent graph kernels due to their remarkable time complexity and predictive performance. Their key concept is based on an implicit comparison of neighborhood representing trees with…

Machine Learning · Computer Science 2021-01-21 Till Hendrik Schulz , Tamás Horváth , Pascal Welke , Stefan Wrobel

We introduce the \emph{temporal graphlet kernel} for classifying dissemination processes in labeled temporal graphs. Such dissemination processes can be spreading (fake) news, infectious diseases, or computer viruses in dynamic networks.…

Social and Information Networks · Computer Science 2022-09-16 Lutz Oettershagen , Nils M. Kriege , Claude Jordan , Petra Mutzel

In this paper, we introduce the notion of a finite non-simple directed graph, called an ornated graph and initiate a study on ornated graphs. An ornated graph is a directed graph on $n$ vertices, denoted by $O_n(s_l)$, whose vertices are…

Combinatorics · Mathematics 2015-05-29 Johan Kok , Sudev Naduvath , Vivian Mukungunugwa

Most graph kernels are an instance of the class of $\mathcal{R}$-Convolution kernels, which measure the similarity of objects by comparing their substructures. Despite their empirical success, most graph kernels use a naive aggregation of…

Machine Learning · Computer Science 2019-10-31 Matteo Togninalli , Elisabetta Ghisu , Felipe Llinares-López , Bastian Rieck , Karsten Borgwardt

The lack of anisotropic kernels in graph neural networks (GNNs) strongly limits their expressiveness, contributing to well-known issues such as over-smoothing. To overcome this limitation, we propose the first globally consistent…

Machine Learning · Computer Science 2021-04-09 Dominique Beaini , Saro Passaro , Vincent Létourneau , William L. Hamilton , Gabriele Corso , Pietro Liò

We propose a representation of graph as a functional object derived from the power iteration of the underlying adjacency matrix. The proposed functional representation is a graph invariant, i.e., the functional remains unchanged under any…

Machine Learning · Computer Science 2014-04-22 Anshumali Shrivastava , Ping Li

We propose a new graph-theoretic benchmark in this paper. The benchmark is developed to address shortcomings of an existing widely-used graph benchmark. We thoroughly studied a large number of traditional and contemporary graph algorithms…

Performance · Computer Science 2010-05-06 Andy B. Yoo , Yang Liu , Sheila Vaidya , Stephen Poole

A commonly occurring computation idiom in neural networks is to perform some pointwise operations on the result of a matrix multiplication. Such a sequence of operations is typically represented as a computation graph in deep learning…

Programming Languages · Computer Science 2020-08-04 Somashekaracharya G. Bhaskaracharya , Julien Demouth , Vinod Grover

For $\alpha > 1$, an $\alpha$-approximate (bi-)kernel is a polynomial-time algorithm that takes as input an instance $(I, k)$ of a problem $\mathcal{Q}$ and outputs an instance $(I',k')$ (of a problem $\mathcal{Q}'$) of size bounded by a…

Data Structures and Algorithms · Computer Science 2018-02-23 Eduard Eiben , Mithilesh Kumar , Amer E. Mouawad , Fahad Panolan , Sebastian Siebertz

Kernels on graphs have had limited options for node-level problems. To address this, we present a novel, generalized kernel for graphs with node feature data for semi-supervised learning. The kernel is derived from a regularization…

Machine Learning · Computer Science 2022-11-29 Yin-Cong Zhi , Felix L. Opolka , Yin Cheng Ng , Pietro Liò , Xiaowen Dong

Numerous important problems can be framed as learning from graph data. We propose a framework for learning convolutional neural networks for arbitrary graphs. These graphs may be undirected, directed, and with both discrete and continuous…

Machine Learning · Computer Science 2016-06-09 Mathias Niepert , Mohamed Ahmed , Konstantin Kutzkov

While kernel methods and Graph Neural Networks offer complementary strengths, integrating the two has posed challenges in efficiency and scalability. The Graph Neural Tangent Kernel provides a theoretical bridge by interpreting GNNs through…

Machine Learning · Computer Science 2025-07-17 Lin Wang , Shijie Wang , Sirui Huang , Qing Li

An ordered graph is a graph enhanced with a linear order on the vertex set. An ordered graph is a core if it does not have an order-preserving homomorphism to a proper subgraph. We say that $H$ is the core of $G$ if (i) $H$ is a core, (ii)…

Computational Complexity · Computer Science 2025-12-01 Michal Čertík , Andreas Emil Feldmann , Jaroslav Nešetřil , Paweł Rzążewski
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