English
Related papers

Related papers: Spontaneous flow created by active topological def…

200 papers

We study the necking of a filament of complex fluid or soft solid subject to uniaxial tensile stretching, under conditions of constant imposed stress and force, by means of linear stability analysis and nonlinear simulations. We demonstrate…

Soft Condensed Matter · Physics 2016-11-22 David M. Hoyle , Suzanne M. Fielding

We numerically model a two-dimensional active nematic confined by a periodic array of fixed obstacles. Even in the passive nematic, the appearance of topological defects is unavoidable due to planar anchoring by the obstacle surfaces. We…

Soft Condensed Matter · Physics 2024-01-25 Cody D. Schimming , C. J. O. Reichhardt , C. Reichhardt

We show that confining extensile nematics in 3D channels leads to the emergence of two self-organized flow states with nonzero helicity. The first is a pair of braided anti-parallel streams - this double helix occurs when the activity is…

Soft Condensed Matter · Physics 2024-04-12 Ryan Keogh , Santhan Chandragiri , Benjamin Loewe , Tapio Ala-Nissila , Sumesh Thampi , Tyler N. Shendruk

The soil bacterium Myxococcus xanthus lives in densely packed groups that form dynamic three-dimensional patterns in response to environmental changes, such as droplet-like fruiting bodies during starvation. The development of these…

Biological Physics · Physics 2021-05-26 Katherine Copenhagen , Ricard Alert , Ned S. Wingreen , Joshua W. Shaevitz

We study the organization of topological defects in a system of nematogens confined to the two-dimensional sphere (S^2). We first perform Monte Carlo simulations of a fluid system of hard rods (spherocylinders) living in the tangent plane…

Soft Condensed Matter · Physics 2009-11-13 Homin Shin , Mark J. Bowick , Xiangjun Xing

With exquisite precision and reproducibility, cells orchestrate the cooperative action of thousands of nanometer-sized molecular motors to carry out mechanical tasks at much larger length scales, such as cell motility, division and…

Soft Condensed Matter · Physics 2013-01-08 Tim Sanchez , Daniel T. N. Chen , Stephen J. DeCamp , Michael Heymann , Zvonimir Dogic

Our understanding of the mechanism by which topological defects are formed in symmetry breaking phase transitions has recently changed. We examine the non-equilibrium dynamics of defect formation for weakly-coupled global O(N) theories…

High Energy Physics - Theory · Physics 2010-11-01 A. J. Gill , R. J. Rivers

Spatiotemporal patterns in multicellular systems are important to understanding tissue dynamics, for instance, during embryonic development and disease. Here, we use a multiphase field model to study numerically the behavior of a…

Soft Condensed Matter · Physics 2025-02-13 Michael Chiang , Austin Hopkins , Benjamin Loewe , M. Cristina Marchetti , Davide Marenduzzo

Recent experimental observations have suggested that topological defects can facilitate the creation of sharp features in developing embryos. Whereas these observations echo established knowledge about the interplay between geometry and…

Soft Condensed Matter · Physics 2023-07-25 Ludwig A. Hoffmann , Livio Nicola Carenza , Luca Giomi

We extend the continuum theories of active nematohydrodynamics to model a two-fluid mixture with separate velocity fields for each fluid component, coupled through a viscous drag. The model is used to study an active nematic fluid, mixed…

Soft Condensed Matter · Physics 2023-08-02 Saraswat Bhattacharyya , Julia M. Yeomans

Active nematics are an important new paradigm in soft condensed matter systems. They consist of rod-like components with an internal driving force pushing them out of equilibrium. The resulting fluid motion exhibits chaotic advection, in…

We numerically study the dynamics of a passive fluid droplet confined within a microchannel whose walls are covered with a thin layer of active gel. The latter represents a fluid of extensile material modelling, for example, a suspension of…

Soft Condensed Matter · Physics 2023-08-10 A. Tiribocchi , M. Durve , M. Lauricella , A. Montessori , S. Succi

The deformation mechanism in amorphous solids subjected to external shear remains poorly understood because of the absence of well-defined topological defects mediating the plastic deformation. The notion of soft spots has emerged as a…

Soft Condensed Matter · Physics 2024-08-20 Arabinda Bera , Matteo Baggioli , Timothy C. Petersen , Amelia C. Y. Liu , Alessio Zaccone

Tuning cell rearrangements is essential in collective cell movement that underlies cancer progression, wound repair, and embryonic development. A key question is how tissue material properties and morphology emerge from cellular factors…

Biological Physics · Physics 2025-07-15 Soumyadipta Ray , Santidan Biswas , Dipjyoti Das

Active nematics are microscopically driven liquid crystals that exhibit dynamical steady states characterized by the creation and annihilation of topological defects. Motivated by experimental realizations of such systems made of biopolymer…

Soft Condensed Matter · Physics 2018-09-05 Abhijeet Joshi , Elias Putzig , Aparna Baskaran , Michael Hagan

We study the structure and dynamics of the interface separating a passive fluid from a microtubule-based active fluid. Turbulent-like active flows power giant interfacial fluctuations, which exhibit pronounced asymmetry between regions of…

We review the dynamical behavior of giant fluid vesicles in various types of external hydrodynamic flow. The interplay between stresses arising from membrane elasticity, hydrodynamic flows, and the ever present thermal fluctuations leads to…

Soft Condensed Matter · Physics 2014-05-12 David Abreu , Michael Levant , Victor Steinberg , Udo Seifert

We study dry, dense active nematics at both particle and continuous levels. Specifically, extending the Boltzmann-Ginzburg-Landau approach, we derive well-behaved hydrodynamic equations from a Vicsek-style model with nematic alignment and…

Soft Condensed Matter · Physics 2019-12-20 Aurelio Patelli , Ilyas Djafer-Cherif , Igor S. Aranson , Eric Bertin , Hugues Chaté

Continuum hydrodynamic models of active liquid crystals have been used to describe dynamic self-organising systems such as bacterial swarms and cytoskeletal gels. A key prediction of such models is the existence of self-stabilising kink…

Soft Condensed Matter · Physics 2009-11-13 S. A. Edwards , J. M. Yeomans

There are two prominent applications of the mathematical concept of topology to the physics of materials: band topology, which classifies different topological insulators and semimetals, and topological defects that represent immutable…

Materials Science · Physics 2022-08-11 Zhi-Kang Lin , Qiang Wang , Yang Liu , Haoran Xue , Baile Zhang , Yidong Chong , Jian-Hua Jiang