Related papers: The Polyhedral Tree Complex
We define a simple orthogonal polyhedron to be a three-dimensional polyhedron with the topology of a sphere in which three mutually-perpendicular edges meet at each vertex. By analogy to Steinitz's theorem characterizing the graphs of…
It was recently shown that a large class of phylogenetic networks, the `labellable' networks, is in bijection with the set of `expanding' covers of finite sets. In this paper, we show how several prominent classes of phylogenetic networks…
In this paper, we study tree--like tableaux, combinatorial objects which exhibit a natural tree structure and are connected to the partially asymmetric simple exclusion process (PASEP). There was a conjecture made on the total number of…
Group presentations are implicit descriptions of 2-dimensional cell complexes with only one vertex. While such complexes are usually sufficient for topological investigations of groups, multi-vertex complexes are often preferable when the…
Polytope complexes are the generalisation of polygon meshes in geo-information systems (GIS) to arbitrary dimension, and a natural concept for accessing spatio-temporal information. Complexes of each dimension have a straight-forward…
This is a survey article on trees, with a modest number of proofs to give a flavor of the way these topologies can be efficiently handled. Trees are defined in set-theorist fashion as partially ordered sets in which the elements below each…
Regions in the Euclidean plane surrounded by circles are fundamental geometric and combinatorial objects. Related studies have been done and we cannot explain them precisely, or roughly, well. We study such regions whose Poincar\'e-Reeb…
In this paper we build an abstract description of vertex algebras from their basic axioms. Starting with Borcherds' notion of a vertex group, we naturally construct a family of multilinear singular maps parameterised by trees. These…
Taking a Feynman categorical perspective, several key aspects of the geometry of surfaces are deduced from combinatorial constructions with graphs. This provides a direct route from combinatorics of graphs to string topology operations via…
We introduce the notion of "binary" positive and complex geometries, giving a completely rigid geometric realization of the combinatorics of generalized associahedra attached to any Dynkin diagram. We also define open and closed "cluster…
We develop basic cluster theory from an elementary point of view using a variation of binary trees which we call mixed cobinary trees. We show that the number of isomorphism classes of such trees is given by the Catalan number Cn where n is…
Skeletal polyhedra and polygonal complexes are finite or infinite periodic structures in 3-space with interesting geometric, combinatorial, and algebraic properties. These structures can be viewed as finite or infinite periodic graphs…
The primary goal of this article is to set up a general theory of coherent cellular approximations of the diagonal for families of polytopes by developing the method introduced by N. Masuda, A. Tonks, H. Thomas and B. Vallette. We apply…
In this paper, we determine the homotopy type of the Morse complex of certain collections of simplicial complexes by studying dominating vertices or strong collapses. We show that if $K$ contains two leaves that share a common vertex, then…
We construct, for each convex polytope, possibly nonrational and nonsimple, a family of compact spaces that are stratified by quasifolds, i.e. each of these spaces is a collection of quasifolds glued together in an suitable way. A quasifold…
This paper introduces a new method to solve the problem of the approximation of the diagonal for face-coherent families of polytopes. We recover the classical cases of the simplices and the cubes and we solve it for the associahedra, also…
This paper uses dualities between facet ideal theory and Stanley-Reisner theory to show that the facet ideal of a simplicial tree is sequentially Cohen-Macaulay. The proof involves showing that the Alexander dual (or the cover dual, as we…
We give a simple description of the face poset of the biassociahedra that generalizes, in a straightforward manner, the description of the faces of the Stasheff's associahedra via planar trees.
We present a version of the weighted cellular matrix-tree theorem that is suitable for calculating explicit generating functions for spanning trees of highly structured families of simplicial and cell complexes. We apply the result to give…
The matching complex of a graph is the simplicial complex whose vertex set is the set of edges of the graph with a face for each independent set of edges. In this paper we completely characterize the pairs (graph, matching complex) for…