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Sharing genome data in a privacy-preserving way stands as a major bottleneck in front of the scientific progress promised by the big data era in genomics. A community-driven protocol named genomic data-sharing beacon protocol has been…

Cryptography and Security · Computer Science 2020-08-25 Kerem Ayoz , Erman Ayday , A. Ercument Cicek

There is an urgent and well-recognized need to extend genetic studies to diverse populations, but several obstacles continue to be prohibitive, including (but not limited to) the difficulty of recruiting individuals from diverse populations…

Populations and Evolution · Quantitative Biology 2021-09-28 Charleston W. K. Chiang

Data science has employed great research efforts in developing advanced analytics, improving data models and cultivating new algorithms. However, not many authors have come across the organizational and socio-technical challenges that arise…

Machine Learning · Computer Science 2022-01-17 Iñigo Martinez , Elisabeth Viles , Igor G. Olaizola

The growing amount of data and advances in data science have created a need for a new kind of cloud platform that provides users with flexibility, strong security, and the ability to couple with supercomputers and edge devices through…

Despite an increasing number of successful interventions designed to broaden participation in computing research, there is still significant attrition among historically marginalized groups in the computing research pipeline. This…

Computers and Society · Computer Science 2024-03-27 James Boerkoel , Mehmet Ergezer

Big data holds critical importance in the current generation of information technology, with applications ranging from financial, industrial, academic to defense sectors. With the exponential rise of open source data from social media and…

Computers and Society · Computer Science 2016-10-28 Karan Jani

The rapid advancement of Generative AI (GenAI) relies heavily on the digital commons, a vast collection of free and open online content that is created, shared, and maintained by communities. However, this relationship is becoming…

The "reproducibility crisis" has been a highly visible source of scientific controversy and dispute. Here, I propose and review several avenues for identifying and prioritizing research studies for the purpose of targeted validation. Of the…

Computers and Society · Computer Science 2018-04-24 Gopal P. Sarma

Keeping up with the research literature plays an important role in the workflow of scientists - allowing them to understand a field, formulate the problems they focus on, and develop the solutions that they contribute, which in turn shape…

Information Retrieval · Computer Science 2023-01-11 Sheshera Mysore , Mahmood Jasim , Haoru Song , Sarah Akbar , Andre Kenneth Chase Randall , Narges Mahyar

Data and Science has stood out in the generation of results, whether in the projects of the scientific domain or business domain. CERN Project, Scientific Institutes, companies like Walmart, Google, Apple, among others, need data to present…

General Literature · Computer Science 2022-01-19 Rogerio Rossi

Universities have been expanding undergraduate data science programs. Involving graduate students in these new opportunities can foster their growth as data science educators. We describe two programs that employ a near-peer mentoring…

Other Statistics · Statistics 2025-08-28 Chiara Sabatti , Qian Zhao

Great advances in computing and communication technology are bringing many benefits to society, with transformative changes and financial opportunities being created in health care, transportation, education, law enforcement, national…

Computers and Society · Computer Science 2016-04-13 Lorrie Cranor , Tal Rabin , Vitaly Shmatikov , Salil Vadhan , Daniel Weitzner

Across academia, government, and industry, data stewards are facing increasing pressure to make datasets more openly accessible for researchers while also protecting the privacy of data subjects. Differential privacy (DP) is one promising…

Human-Computer Interaction · Computer Science 2023-02-24 Jayshree Sarathy , Sophia Song , Audrey Haque , Tania Schlatter , Salil Vadhan

Data science education is increasingly involving human subjects and societal issues such as privacy, ethics, and fairness. Data scientists need to be equipped with skills to tackle the complexities of the societal context surrounding their…

Computers and Society · Computer Science 2022-05-02 Deniz Marti , Michael D. Smith

This paper reviews literature pertaining to the development of data science as a discipline, current issues with data bias and ethics, and the role that the discipline of information science may play in addressing these concerns.…

Digital Libraries · Computer Science 2025-06-05 Brady D. Lund , Ting Wang

Our society is digital: industry, science, governance, and individuals depend, often transparently, on the inter-operation of large numbers of distributed computer systems. Although the society takes them almost for granted, these computer…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-02-23 Alexandru Iosup , Alexandru Uta , Laurens Versluis , Georgios Andreadis , Erwin van Eyk , Tim Hegeman , Sacheendra Talluri , Vincent van Beek , Lucian Toader

To better understand DNA's 3D folding in cell nuclei, researchers developed chromosome capture methods such as Hi-C that measure the contact frequencies between all DNA segment pairs across the genome. As Hi-C data sets often are massive,…

Biological Physics · Physics 2023-11-14 Anton Holmgren , Dolores Bernenko , Ludvig Lizana

Quantum information is a rapidly-growing interdisciplinary field at the intersection of information science, computer science, mathematics, philosophy, and quantum science, working at the core of our quantum technologies. Regardless of its…

Physics and Society · Physics 2025-01-24 Ana Belén Sainz

Big Data works perfectly along with Deep learning to extract knowledge from a huge amount of data. However, this processing could take a lot of training time. Genomics is a Big Data science with high dimensionality. It relies on deep…

Neural and Evolutionary Computing · Computer Science 2024-05-28 Tasnim Assali , Zayneb Trabelsi Ayoub , Sofiane Ouni

The ongoing explosion of genome sequence data is transforming how we reconstruct and understand the histories of biological systems. Across biological scales, from individual cells to populations and species, trees-based models provide a…

Populations and Evolution · Quantitative Biology 2025-12-08 Yun Deng , Shing H. Zhan , Yulin Zhang , Chao Zhang , Bingjie Chen
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