English
Related papers

Related papers: Bivalent Kinetics: Insights from Many Body Physics

200 papers

Multivalent binding employs multiple simultaneous supramolecular interactions, increasing avidity and selectivity compared with monovalent binding. While equilibrium aspects of multivalency are well characterized, non-equilibrium behavior…

Soft Condensed Matter · Physics 2026-05-27 Vid Ravnik , Baptiste Chabaud , Urban Bren , Galina V. Dubacheva , Tine Curk

Multivalency is prevalent in various biological systems and applications due to the superselectivity that arises from the cooperativity of multivalent binding. Traditionally, it was thought that weaker individual binding would improve the…

Soft Condensed Matter · Physics 2023-04-13 Xiuyang Xia , Ge Zhang , Massimo Pica Ciamarra , Yang Jiao , Ran Ni

Multivalent particles have the ability to form multiple bonds to a substrate. Hence, a multivalent interaction can be strong, even if the individual bonds are weak. However, much more interestingly, multivalency greatly increases the…

Soft Condensed Matter · Physics 2017-04-04 Tine Curk , Jure Dobnikar , Daan Frenkel

The utilization of multiple phosphorylation sites in regulating a biological response is ubiquitous in cell signaling. If each site contributes an additional, equivalent binding site, then one consequence of an increase in the number of…

Subcellular Processes · Quantitative Biology 2009-11-13 Jason W. Locasale

The inverse problem of designing component interactions to target emergent structure is fundamental to numerous applications in biotechnology, materials science, and statistical physics. Equally important is the inverse problem of designing…

Computational Physics · Physics 2020-11-20 Carl P. Goodrich , Ella M. King , Samuel S. Schoenholz , Ekin D. Cubuk , Michael Brenner

There is a vast literature showing the connection between a deformed relativistic kinematics and a curved momentum space, and, in particular, how the former can be obtained from the geometrical properties of the latter. However, there is…

General Relativity and Quantum Cosmology · Physics 2021-07-14 J. J. Relancio

Multivalent cargo that can interact with substrates via multiple interaction sites exhibit shared characteristics despite being found in different systems at different length-scales. Here, a general analytical model has been developed that…

Subcellular Processes · Quantitative Biology 2021-11-16 Lewis Scott Mosby , Anne Straube , Marco Polin

In most studies of the capacity of quantum channels, it is assumed that the errors in each use of the channel are independent. However, recent work has begun to investigate the effects of memory or correlations in the error, and has led to…

Quantum Physics · Physics 2008-05-10 M. B. Plenio , S. Virmani

Doubly special relativity has been studied for the last twenty years as a way to go beyond the special relativistic kinematics, trying to capture residual effects of a quantum gravity theory. In particular, in doubly special relativity the…

General Relativity and Quantum Cosmology · Physics 2022-07-19 J. J. Relancio

The multi-agent system has been a hot topic in the past few decades owing to its lower cost, higher robustness, and higher flexibility. As a particular multi-agent system, the multiple rigid body system received a growing interest for its…

Systems and Control · Electrical Eng. & Systems 2023-08-29 X. Jin , Daniel W. C. Ho , Y. Tang

Multivalency is a common biological mechanism of formation of strong reversible and selective bonds by grouping weak bonds. Polymers often act as a scaffold to which multiple binding groups are attached. Here I present an analytical theory…

Soft Condensed Matter · Physics 2020-12-29 Elena Patyukova

We analyse a mechanical system in two-dimensional relative motion with friction. Although the system is simple, the peculiar interplay between two kinetic friction forces and gravity leads to the wide range of admissible solutions exceeding…

Physics Education · Physics 2007-05-23 Dariusz Grech , Zygmunt Mazur

Biomolecular self-assembly spatially segregates proteins with a limited number of binding sites (valence) into condensates that coexist with a dilute phase. We develop a many-body lattice model for a three-component system of proteins with…

Soft Condensed Matter · Physics 2022-01-13 Saroj Kumar Nandi , Daniel Österle , Meta Heidenreich , Emmanuel D. Levy , Samuel A. Safran

The purpose of this note is to present several aspects of concentration phenomena in high dimensional geometry. At the heart of the study is a geometric analysis point of view coming from the theory of high dimensional convex bodies. The…

Functional Analysis · Mathematics 2013-10-07 Olivier Guédon

Reversible conversion over multi-million-times in bond types between metavalent and covalent bonds becomes one of the most promising bases for universal memory. As the conversions have been found in metastable states, extended category of…

Materials Science · Physics 2022-12-07 Dasol Kim , Youngsam Kim , Jin-Su Oh , Changwoo Lee , Hyeonwook Lim , Cheol-Woong Yang , Eunji Sim , Mann-Ho Cho

Attention mechanisms are developing into a viable alternative to convolutional layers as elementary building block of NNs. Their main advantage is that they are not restricted to capture local dependencies in the input, but can draw…

Machine Learning · Computer Science 2021-09-07 Thorben Frank , Stefan Chmiela

Scale invariance is a central organizing principle in physics, underlying phenomena that range from critical behaviour in statistical mechanics to transport and chaos in nonlinear dynamical systems. Here we present a unified and physically…

Statistical Mechanics · Physics 2026-02-23 Edson D. Leonel , Diego F. M. Oliveira

A number of physical processes show some form of bifurcation or periodic splintering of a single distribution into two new ones. Recently, it has been noted that cavity searches for interactions between photons and exotic fields may also…

Instrumentation and Methods for Astrophysics · Physics 2013-07-09 C. Scarlett

One fundamental assumption in statistical physics is that generic closed quantum many-body systems thermalize under their own dynamics. Recently, the emergence of many-body localized systems has questioned this concept, challenging our…

Perceptual learning enables humans to recognize and represent stimuli invariant to various transformations and build a consistent representation of the self and physical world. Such representations preserve the invariant physical relations…

Neural and Evolutionary Computing · Computer Science 2020-07-02 Du Xiaorui , Yavuzhan Erdem , Immanuel Schweizer , Cristian Axenie
‹ Prev 1 2 3 10 Next ›