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Related papers: Modeling COVID-19 Transmission using IDSIM, an Epi…

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Owing to the ongoing COVID-19 pandemic and other recent global epidemics, epidemic simulation frameworks are gaining rapid significance. In this work, we present a workflow that will allow researchers to simulate the spread of an infectious…

Social and Information Networks · Computer Science 2024-11-11 Reet Barik , Marco Minutoli , Mahantesh Halappanavar , Ananth Kalyanaraman

Motivated by the increasing number of COVID-19 cases that have been observed in many countries after the vaccination and relaxation of non-pharmaceutical interventions, we propose a mathematical model on time-varying networks for the spread…

Dynamical Systems · Mathematics 2022-03-09 Kathinka Frieswijk , Lorenzo Zino , Ming Cao

We explore the inclusion of vaccination in compartmental epidemiological models concerning the delta and omicron variants of the SARS-CoV-2 virus that caused the COVID-19 pandemic. We expand on our earlier compartmental-model work by…

Populations and Evolution · Quantitative Biology 2023-04-24 J. Cuevas-Maraver , P. G. Kevrekidis , Q. Y. Chen , G. A. Kevrekidis , Y. Drossinos

Mathematical and simulation models are often used to predict the spread of a disease and estimate the impact of public health interventions, and many such models have been developed and used during the COVID-19 pandemic. This paper…

Populations and Evolution · Quantitative Biology 2024-03-18 Jeffrey W. Herrmann , Hongjie Liu , Donald K. Milton

Objective: To develop machine learning models that can predict the number of COVID-19 cases per day given the last 14 days of environmental and mobility data. Approach: COVID-19 data from four counties around Toronto, Ontario, were used.…

Machine Learning · Computer Science 2023-03-21 Daniel L. Silver , Rinda Digamarthi

The ongoing COVID-19 pandemic calls for a multi-faceted public health response comprising complementary interventions to control the spread of the disease while vaccines and therapies are developed. Many of these interventions need to be…

Applications · Statistics 2020-08-24 Andres Colubri , Kailash Yadav , Abhishek Jha , Pardis C. Sabeti

The number of confirmed COVID-19 cases reached over 1.3 million in Ontario, Canada by June 4, 2022. The continued spread of the virus underlying COVID-19 has been spurred by the emergence of variants since the initial outbreak in December,…

Populations and Evolution · Quantitative Biology 2022-10-25 Yuxuan Zhao , Samuel W. K. Wong

This paper uses Covasim, an agent-based model (ABM) of COVID-19, to evaluate and scenarios of epidemic spread in New York State (USA), the UK, and the Novosibirsk region (Russia). Epidemiological parameters such as contagiousness (virus…

Optimization and Control · Mathematics 2022-02-09 Olga Krivorotko , Mariia Sosnovskaia , Ivan Vashchenko , Cliff Kerr , Daniel Lesnic

Epidemiological models with constant parameters may not capture satisfactory infection patterns in the presence of pharmaceutical and non-pharmaceutical mitigation measures during a pandemic, since infectiousness is a function of time. In…

Populations and Evolution · Quantitative Biology 2022-05-16 K. D. Olumoyin , A. Q. M. Khaliq , K. M. Furati

With the present highly infectious dominant SARS-CoV-2 strain of B1.1.529 or Omicron spreading around the globe, there is concern that the COVID-19 pandemic will not end soon and that it will be a race against time until a more contagious…

Populations and Evolution · Quantitative Biology 2022-04-26 Chottiwatt Jittprasong

Emerging in December 2019, the COVID-19 pandemic caused widespread health, economic, and social disruptions. Rapid global transmission overwhelmed healthcare systems, resulting in high infection rates, hospitalisations, and fatalities. To…

Populations and Evolution · Quantitative Biology 2025-10-08 Zacharias Komodromos , Kleanthis Malialis , Panayiotis Kolios

In the recent COVID-19 pandemic we assisted at a sequence of epidemic waves intertwined by anomalous fade-outs with periods of low but persistent epidemic prevalence. These long-living epidemic states complicate epidemic control and…

Physics and Society · Physics 2025-08-27 Javier Aguilar , Beatriz Arregui García , Raúl Toral , Sandro Meloni , Jose J. Ramasco

The investment of time and resources for better strategies and methodologies to tackle a potential pandemic is key to deal with potential outbreaks of new variants or other viruses in the future. In this work, we recreated the scene of a…

Machine Learning · Computer Science 2021-04-22 Andrés L. Suárez-Cetrulo , Ankit Kumar , Luis Miralles-Pechuán

A reasonable prediction of infectious diseases transmission process under different disease control strategies is an important reference point for policy makers. Here we established a dynamic transmission model via Python and realized…

Populations and Evolution · Quantitative Biology 2021-02-23 Yuxuan Zhang , Chen Gong , Dawei Li , Zhi-Wei Wang , Shengda D Pu , Alex W Robertson , Hong Yu , John Parrington

Phenomenological and deterministic models are often used for the estimation of transmission parameters in an epidemic and for the prediction of its growth trajectory. Such analyses are usually based on single peak outbreak dynamics. In…

Populations and Evolution · Quantitative Biology 2022-01-20 D. P. Mahapatra , S. Triambak

Background: Recently, a high number of daily positive COVID-19 cases have been reported in regions with relatively high vaccination rates; hence, booster vaccination has become necessary. In addition, infections caused by the different…

Machine Learning · Computer Science 2022-08-26 Essam A. Rashed , Sachiko Kodera , Akimasa Hirata

COVID-19 pandemic is one of the major disasters that humanity has ever faced. In this paper, we try to model the effect of vaccination in controlling the pandemic, particularly in context to the third wave which is predicted to hit…

Populations and Evolution · Quantitative Biology 2022-07-27 Sourav Chowdhury , Suparna Roychowdhury , Indranath Chaudhuri

Students develop and test simple models of the spread of COVID-19. Microsoft Excel is used as the modeling platform because it's non-threatening to students and because it's widely available. Students develop finite difference models and…

Physics Education · Physics 2021-12-14 Peter Hugo Nelson

Motivated by massive outbreaks of COVID-19 that occurred even in populations with high vaccine uptake, we propose a novel multi-population temporal network model for the spread of recurrent epidemic diseases. We study the effect of human…

Dynamical Systems · Mathematics 2022-09-19 Kathinka Frieswijk , Lorenzo Zino , Ming Cao

In response to the ongoing pandemic and health emergency of COVID-19, several models have been used to understand the dynamics of virus spread. Some employ mathematical models like the compartmental SEIHRD approach and others rely on…

Computational Geometry · Computer Science 2024-09-10 Raunak Sarbajna , Karima Elgarroussi , Hoang D Vo , Jianyuan Ni , Christoph F. Eick
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