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Related papers: TCoMX: Tomotherapy Complexity Metrics EXtractor

200 papers

Medical images come in high resolutions. A high resolution is vital for finding malignant tissues at an early stage. Yet, this resolution presents a challenge in terms of modeling long range dependencies. Shallow transformers eliminate this…

Computer Vision and Pattern Recognition · Computer Science 2022-08-15 Ahmed Taha , Yen Nhi Truong Vu , Brent Mombourquette , Thomas Paul Matthews , Jason Su , Sadanand Singh

We present MXtalTools, a flexible Python package for the data-driven modelling of molecular crystals, facilitating machine learning studies of the molecular solid state. MXtalTools comprises several classes of utilities: (1) synthesis,…

Machine Learning · Computer Science 2025-11-26 Michael Kilgour , Mark E. Tuckerman , Jutta Rogal

Various models have been proposed to perform object detection. However, most require many handdesigned components such as anchors and non-maximum-suppression(NMS) to demonstrate good performance. To mitigate these issues, Transformer-based…

Computer Vision and Pattern Recognition · Computer Science 2022-06-16 Sang Yon Lee

State-of-the-art trainable machine translation evaluation metrics like xCOMET achieve high correlation with human judgment but rely on large encoders (up to 10.7B parameters), making them computationally expensive and inaccessible to…

Computation and Language · Computer Science 2024-11-11 Daniil Larionov , Mikhail Seleznyov , Vasiliy Viskov , Alexander Panchenko , Steffen Eger

Transmission matrix (TM) allows light control through complex media such as multimode fibers (MMFs), gaining great attention in areas like biophotonics over the past decade. The measurement of a complex-valued TM is highly desired as it…

Traction Force Microscopy (TFM) computes the forces exerted at the surface of an elastic material by measuring induced deformations in volume. It is used to determine the pattern of the adhesion forces exerted by cells or by cellular…

Biological Physics · Physics 2018-02-09 Stanislav Makarchuk , Nicolas Beyer , Christian Gaiddon , Wilfried Grange , Pascal Hébraud

Widely used learned metrics for machine translation evaluation, such as COMET and BLEURT, estimate the quality of a translation hypothesis by providing a single sentence-level score. As such, they offer little insight into translation…

Computation and Language · Computer Science 2023-10-17 Nuno M. Guerreiro , Ricardo Rei , Daan van Stigt , Luisa Coheur , Pierre Colombo , André F. T. Martins

Monte Carlo (MC) methods provide the most accurate to-date dose calculations in heterogeneous media and complex geometries, and this spawns increasing interest in incorporating MC calculations into treatment planning quality assurance…

Medical Physics · Physics 2009-01-07 C. Locke , S. Zavgorodni

Muscle synergies have recently been utilised in myoelectric control systems. Thus far, all proposed synergy-based systems rely on matrix factorisation methods. However, this is limited in terms of task-dimensionality. Here, the potential…

Signal Processing · Electrical Eng. & Systems 2021-07-08 Ahmed Ebied , Eli Kinney-Lang , Javier Escudero

This system paper presents the Topology ToolKit (TTK), a software platform designed for topological data analysis in scientific visualization. TTK provides a unified, generic, efficient, and robust implementation of key algorithms for the…

Graphics · Computer Science 2019-07-18 Julien Tierny , Guillaume Favelier , Joshua A. Levine , Charles Gueunet , Michael Michaux

We present FluxCT V2.0, an updated web tool for identifying contaminating flux in Kepler and TESS target pixel files. FluxCT V2.0 focuses on enhancing functionality, user experience, and data processing capabilities. We resolved existing…

Instrumentation and Methods for Astrophysics · Physics 2025-04-04 Zillin Dong , Jessica Schonhut-Stasik , Keivan G. Stassun

We propose TG-LMM (Text-Guided Large Multi-Modal Model), a novel approach that leverages textual descriptions of organs to enhance segmentation accuracy in medical images. Existing medical image segmentation methods face several challenges:…

Computer Vision and Pattern Recognition · Computer Science 2024-09-06 Yihao Zhao , Enhao Zhong , Cuiyun Yuan , Yang Li , Man Zhao , Chunxia Li , Jun Hu , Chenbin Liu

Topological integral transforms have found many applications in shape analysis, from prediction of clinical outcomes in brain cancer to analysis of barley seeds. Using Euler characteristic as a measure, these objects record rich geometric…

Computational Geometry · Computer Science 2024-05-06 Vadim Lebovici , Steve Oudot , Hugo Passe

We introduce a simple but practical method to measure the optical transmission matrix (TM) of complex media. The optical TM of a complex medium is obtained by modulating the wavefront of a beam impinging on the complex medium and imaging…

Optics · Physics 2015-06-23 Jonghee Yoon , KyeoReh Lee , Jongchan Park , YongKeun Park

There exists no comprehensive metric for describing the complexity of Multi-Object Tracking (MOT) sequences. This lack of metrics decreases explainability, complicates comparison of datasets, and reduces the conversation on tracker…

Computer Vision and Pattern Recognition · Computer Science 2022-07-21 Malte Pedersen , Joakim Bruslund Haurum , Patrick Dendorfer , Thomas B. Moeslund

TextDescriptives is a Python package for calculating a large variety of metrics from text. It is built on top of spaCy and can be easily integrated into existing workflows. The package has already been used for analysing the linguistic…

Computation and Language · Computer Science 2023-10-30 Lasse Hansen , Ludvig Renbo Olsen , Kenneth Enevoldsen

Extracting drug use information from unstructured Electronic Health Records remains a major challenge in clinical Natural Language Processing. While Large Language Models demonstrate advancements, their use in clinical NLP is limited by…

Computation and Language · Computer Science 2026-02-11 Huu-Huy-Hoang Tran , Gia-Bao Duong , Quoc-Viet-Anh Tran , Thi-Hai-Yen Vuong , Hoang-Quynh Le

In our exploration of Composable Memory systems utilizing CXL, we focus on overcoming adoption barriers at Hyperscale, underscored by economic models demonstrating Total Cost of Ownership (TCO). While CXL addresses the pressing memory…

Emerging Technologies · Computer Science 2024-04-05 Angelos Arelakis , Nilesh Shah , Yiannis Nikolakopoulos , Dimitrios Palyvos-Giannas

We study modified trigonometric integrators, which generalize the popular class of trigonometric integrators for highly oscillatory Hamiltonian systems by allowing the fast frequencies to be modified. Among all methods of this class, we…

Numerical Analysis · Mathematics 2014-07-18 Robert I. McLachlan , Ari Stern

Although Raman spectroscopy is widely used for the investigation of biomedical samples and has a high potential for use in clinical applications, it is not common in clinical routines. One of the factors that obstruct the integration of…

Data Analysis, Statistics and Probability · Physics 2022-01-20 Darina Storozhuk , Oleg Ryabchykov , Juergen Popp , Thomas Bocklitz