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Self-propelled swimmers such as bacteria agglomerate into clusters as a result of their persistent motion. In 1D, those clusters do not coalesce macroscopically and the stationary cluster size distribution (CSD) takes an exponential form.…

Soft Condensed Matter · Physics 2021-09-20 Pablo de Castro , Francisco M. Rocha , Saulo Diles , Rodrigo Soto , Peter Sollich

We present new theoretical and empirical results on the probability distributions of species persistence times in natural ecosystems. Persistence times, defined as the timespans occurring between species' colonization and local extinction…

Populations and Evolution · Quantitative Biology 2012-03-21 S. Suweis , E. Bertuzzo , L. Mari , I. Rodriguez-Iturbe , A. Maritan , A. Rinaldo

Harmful marine spills, such as algae blooms and oil spills, damage ecosystems and threaten public health tremendously. Hence, an effective spill coverage and removal strategy will play a significant role in environmental protection. In…

Robotics · Computer Science 2020-09-04 Shaocheng Luo , Jonghoek Kim , Byung-Cheol Min

Typically, in the description of active Brownian particles, a constant effective propulsion force is assumed, which is then subjected to fluctuations in orientation and translation leading to a persistent random walk with an enlarged…

Soft Condensed Matter · Physics 2014-02-28 Sonja Babel , Borge ten Hagen , Hartmut Löwen

Understanding how species persist under interacting stressors is a central challenge in ecology. We develop a spatially explicit reaction-diffusion framework to investigate competing species in landscapes shaped by climate variability,…

Populations and Evolution · Quantitative Biology 2026-02-02 Ton Viet Ta

Optimization of resource distribution has been a challenging topic in current society. To explore this topic, we develop a Coalition Control Model(CCM) based on the Model Predictive Control(MPC) and test it using a fishing model with linear…

Multiagent Systems · Computer Science 2020-11-26 Weizhi Du , Harvey Tian

A complex interplay between species governs the evolution of spatial patterns in ecology. An open problem in the biological sciences is characterising spatio-temporal data and understanding how changes at the local scale affect global…

Quantitative Methods · Quantitative Biology 2023-08-15 Robert A. McDonald , Rosanna Neuhausler , Martin Robinson , Laurel G. Larsen , Heather A. Harrington , Maria Bruna

Hypothesis: Diffusion in confinement is an important fundamental problem with significant implications for applications of supported liquid phases. However, resolving the spatially dependent diffusion coefficient, parallel and perpendicular…

Unbiased shuffling algorithms, such as the Fisher-Yates shuffle, are often used for shuffle play in media players. These algorithms treat all items being shuffled equally regardless of how similar the items are to each other. While this may…

Social and Information Networks · Computer Science 2020-06-18 Kevin Su

Scientific data, from cellular snapshots in biology to celestial distributions in cosmology, often consists of static patterns from underlying dynamical systems. These snapshots, while lacking temporal ordering, implicitly encode the…

Machine Learning · Computer Science 2025-09-23 Yanbo Zhang , Michael Levin

Efficient sorting of target cells is crucial for advancing cellular research in biology and medical diagnostics. Inertial microfluidics, an emerging technology, offers a promising approach for label-free particle sorting with high…

Fluid Dynamics · Physics 2023-08-04 Sayan Karmakar , Md Safwan Mondal , Anish Pal , Sourav Sarkar

We address the question of how to connect predictions by hydrodynamic models of how sea lice move in water to observable measures that count the number of lice on each fish in a cage in the water. This question is important for management…

Populations and Evolution · Quantitative Biology 2024-11-14 William Waites , Philip Gillibrand , Thomas Adams , Rek Bell , Duncan Guthrie , Tróndur Kragesteen , Crawford Revie , Meadhbh Moriarty

Locally broken symmetries are used across fields to transport matter, particles and information in preferential directions. Beyond local mechanisms, spatially distributed nonlinearities in crystalline media have enabled non-reciprocal…

Soft Condensed Matter · Physics 2026-03-31 Aaron Winn , Justine Parmentier , Eleni Katifori , Martin Brandenbourger

Obtaining reliable and precise estimates of wildlife species abundance and distribution is essential for the conservation and management of animal populations and natural reserves. Spatial capture-recapture (SCR) models provide estimates of…

This work focuses on the formation of mating aggregates in zooplankton. In particular, sexual encounters are behaviourally supported by males actively swimming in search for females, and approaching them for mating once they are found.…

Populations and Evolution · Quantitative Biology 2022-05-19 Ron Shnapp , François-Gaël Michalec , Markus Holzner

Navigation of microorganisms is controlled by internal processes ultimately sensitive to mechanical or chemical signaling encountered along the path. In many natural environments, such as porous soils or physiological ducts, motile species…

Vertical migrations of zooplankters have been widely described, but their active movements through shallow, highly dynamic water columns within the inner shelf may be more complex and difficult to characterize. In this study, invertebrate…

Quantitative Methods · Quantitative Biology 2024-01-22 Nicolas Weidberg , Wayne Goschen , Jennifer M. Jackson , Paula Pattrick , Christopher D. McQuaid , Francesca Porri

Obtaining a detailed understanding of the physical interactions between a cell and its environment often requires information about the flow of fluid surrounding the cell. Cells must be able to effectively absorb and discard material in…

Biological Physics · Physics 2017-09-04 Nathaniel J. Fuller , Nicholas A. Licata

I present a new framework for modeling the dynamics of tidal streams. The framework consists of simple models for the initial action-angle distribution of tidal debris, which can be straightforwardly evolved forward in time. Taking…

Astrophysics of Galaxies · Physics 2014-10-17 Jo Bovy

Diffusion models are effective for waypoint prediction in visual navigation, but standard sampling and test time guidance can produce unreliable or inefficient trajectories when updates drift off the training manifold. We propose Fisher…

Robotics · Computer Science 2026-05-29 Hao Ren , Zetong Bi , Yiming Zeng , Le Zheng , Zhi Li , Zhaoliang Wan , Lu Qi , Hui Cheng