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Continuous, automated monitoring of laboratory mice enables more accurate data collection and improves animal welfare through real-time insights. Researchers can achieve a more dynamic and clinically relevant characterization of disease…

Computer Vision and Pattern Recognition · Computer Science 2025-07-11 Juan Pablo Oberhauser , Daniel Grzenda

The study of mouse social behaviours has been increasingly undertaken in neuroscience research. However, automated quantification of mouse behaviours from the videos of interacting mice is still a challenging problem, where object tracking…

Computer Vision and Pattern Recognition · Computer Science 2022-03-28 Zheheng Jiang , Zhihua Liu , Long Chen , Lei Tong , Xiangrong Zhang , Xiangyuan Lan , Danny Crookes , Ming-Hsuan Yang , Huiyu Zhou

Hoping to stimulate new research in individual animal identification from images, we propose to formulate the problem as the human-machine Continual Curation of images and animal identities. This is an open world recognition problem, where…

Computer Vision and Pattern Recognition · Computer Science 2021-06-22 Charles V. Stewart , Jason R. Parham , Jason Holmberg , Tanya Y. Berger-Wolf

The ability for an autonomous agent or robot to track and identify potentially multiple objects in a dynamic environment is essential for many applications, such as automated surveillance, traffic monitoring, human-robot interaction, etc.…

Computer Vision and Pattern Recognition · Computer Science 2016-05-26 Aijun Bai

Studying animal locomotion improves our understanding of motor control and aids in the treatment of motor impairment. Mice are a premier model of human disease and are the model system of choice for much of basic neuroscience. High frame…

Computer Vision and Pattern Recognition · Computer Science 2018-02-08 Omid Haji Maghsoudi , Mahdi Alizadeh

Recognizing individual animals over time is central to many ecological and conservation questions, including estimating abundance, survival, movement, and social structure. Recent advances in automated identification from images and even…

Automatic detection of animals that have strayed into human inhabited areas has important security and road safety applications. This paper attempts to solve this problem using deep learning techniques from a variety of computer vision…

Computer Vision and Pattern Recognition · Computer Science 2020-01-15 Abhineet Singh , Marcin Pietrasik , Gabriell Natha , Nehla Ghouaiel , Ken Brizel , Nilanjan Ray

Animals are described as effectively camouflaged when they blend seamlessly with their surrounding, yet no standardized quantitative measure of this seamlessness exists. We address this gap by framing camouflage evaluation as a visual…

Computer Vision and Pattern Recognition · Computer Science 2026-05-19 Amin Karimi Monsefi , Abolfazl Meyarian , Mridul Khurana , Shuheng Wang , Pouyan Navard , Cheng Zhang , Anuj Karpatne , Wei-Lun Chao , Rajiv Ramnath

Identifying individual animals is crucial for many biological investigations. In response to some of the limitations of current identification methods, new automated computer vision approaches have emerged with strong performance. Here, we…

Computer Vision and Pattern Recognition · Computer Science 2021-12-22 Maxime Vidal , Nathan Wolf , Beth Rosenberg , Bradley P. Harris , Alexander Mathis

Event-based object detection has recently garnered attention in the computer vision community due to the exceptional properties of event cameras, such as high dynamic range and no motion blur. However, feature asynchronism and sparsity…

Computer Vision and Pattern Recognition · Computer Science 2024-09-19 Ting-Kang Yen , Igor Morawski , Shusil Dangi , Kai He , Chung-Yi Lin , Jia-Fong Yeh , Hung-Ting Su , Winston Hsu

This study introduces markerless retro-identification of animals, a novel concept and practical technique to identify past occurrences of organisms in archived data, that complements traditional forward-looking chronological…

Computer Vision and Pattern Recognition · Computer Science 2024-05-24 Asaduz Zaman , Vanessa Kellermann , Alan Dorin

The behavioural research of pigs can be greatly simplified if automatic recognition systems are used. Especially systems based on computer vision have the advantage that they allow an evaluation without affecting the normal behaviour of the…

Computer Vision and Pattern Recognition · Computer Science 2020-09-03 Johannes Brünger , Maria Gentz , Imke Traulsen , Reinhard Koch

To ensure animal welfare and effective management in pig farming, monitoring individual behavior is a crucial prerequisite. While monitoring tasks have traditionally been carried out manually, advances in machine learning have made it…

Computer Vision and Pattern Recognition · Computer Science 2025-12-02 Jonathan Henrich , Christian Post , Maximilian Zilke , Parth Shiroya , Emma Chanut , Amir Mollazadeh Yamchi , Ramin Yahyapour , Thomas Kneib , Imke Traulsen

Identifying individual animals in long-duration videos is essential for behavioral ecology, wildlife monitoring, and livestock management. Traditional methods require extensive manual annotation, while existing self-supervised approaches…

Computer Vision and Pattern Recognition · Computer Science 2026-01-15 Xuyang Fang , Sion Hannuna , Edwin Simpson , Neill Campbell

Monocular object detection and tracking have improved drastically in recent years, but rely on a key assumption: that objects are visible to the camera. Many offline tracking approaches reason about occluded objects post-hoc, by linking…

Computer Vision and Pattern Recognition · Computer Science 2020-12-16 Tarasha Khurana , Achal Dave , Deva Ramanan

In animal facilities, continuous surveillance of penguins is essential yet technically challenging due to their homogeneous visual characteristics, rapid and frequent posture changes, and substantial environmental noise such as water…

Computer Vision and Pattern Recognition · Computer Science 2026-03-05 Kasumi Seko , Hiroki Kinoshita , Raj Rajeshwar Malinda , Hiroaki Kawashima

Quantifying behavior is crucial for many applications in neuroscience. Videography provides easy methods for the observation and recording of animal behavior in diverse settings, yet extracting particular aspects of a behavior for further…

Computer Vision and Pattern Recognition · Computer Science 2018-08-24 Alexander Mathis , Pranav Mamidanna , Taiga Abe , Kevin M. Cury , Venkatesh N. Murthy , Mackenzie W. Mathis , Matthias Bethge

We propose a method that robustly exploits background and foreground in visual identification of individual animals. Experiments show that their automatic separation, made easy with methods like Segment Anything, together with independent…

Computer Vision and Pattern Recognition · Computer Science 2024-08-26 Lukas Picek , Lukas Neumann , Jiri Matas

Developing a robust object tracker is a challenging task due to factors such as occlusion, motion blur, fast motion, illumination variations, rotation, background clutter, low resolution and deformation across the frames. In the literature,…

Computer Vision and Pattern Recognition · Computer Science 2024-06-17 Sandeep Singh Sengar

Individual pig detection and tracking is an important requirement in many video-based pig monitoring applications. However, it still remains a challenging task in complex scenes, due to problems of light fluctuation, similar appearances of…

Computer Vision and Pattern Recognition · Computer Science 2018-12-13 Lei Zhang , Helen Gray , Xujiong Ye , Lisa Collins , Nigel Allinson
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