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Clustering is a central tool in biomedical research for discovering heterogeneous patient subpopulations, where group boundaries are often diffuse rather than sharply separated. Traditional methods produce hard partitions, whereas soft…

Methodology · Statistics 2026-01-07 Qiuyi Wu , Zihan Zhu , Anru R. Zhang

This article represents one of the contemporary trends in the application of the latest methods of classification in business, where intense competition and the desire to expand drive this science to far-reaching prospects using the…

Computers and Society · Computer Science 2018-02-13 Ismail Kayali

IntLevPy provides a comprehensive description of the IntLevPy Package, a Python library designed for simulating and analyzing intermittent and L\'evy processes. The package includes functionalities for process simulation, including full…

Neural and Evolutionary Computing · Computer Science 2025-09-05 Shailendra Bhandari , Pedro Lencastre , Sergiy Denysov , Yurii Bystryk , Pedro G. Lind

Models used for control design are, to some degree, uncertain. Model uncertainty must be accounted for to ensure the robustness of the closed-loop system. $\mu$-analysis and $\mu$-synthesis methods allow for the analysis and design of…

Systems and Control · Electrical Eng. & Systems 2025-11-19 Timothy Everett Adams , Steven Dahdah , James Richard Forbes

Recently, contiguous sequential pattern mining (CSPM) gained interest as a research topic, due to its varied potential real-world applications, such as web log and biological sequence analysis. To date, studies on the CSPM problem remain in…

Databases · Computer Science 2021-11-02 Chunkai Zhang , Quanjian Dai , Zilin Du , Wensheng Gan , Jian Weng , Philip S. Yu

With the recent rapid progress in the study of deep generative models (DGMs), there is a need for a framework that can implement them in a simple and generic way. In this research, we focus on two features of DGMs: (1) deep neural networks…

Machine Learning · Computer Science 2023-09-25 Masahiro Suzuki , Takaaki Kaneko , Yutaka Matsuo

Flaky tests obstruct software development, and studying and proposing mitigations against them has therefore become an important focus of software engineering research. To conduct sound investigations on test flakiness, it is crucial to…

Software Engineering · Computer Science 2023-05-09 Martin Gruber , Gordon Fraser

This paper describes a novel Python package, named causalgraph, for modeling and saving causal graphs embedded in knowledge graphs. The package has been designed to provide an interface between causal disciplines such as causal discovery…

Artificial Intelligence · Computer Science 2023-01-23 Sven Pieper , Carl Willy Mehling , Dominik Hirsch , Tobias Lüke , Steffen Ihlenfeldt

QuaPy is an open-source framework for performing quantification (a.k.a. supervised prevalence estimation), written in Python. Quantification is the task of training quantifiers via supervised learning, where a quantifier is a predictor that…

Machine Learning · Computer Science 2021-06-22 Alejandro Moreo , Andrea Esuli , Fabrizio Sebastiani

The causalfe package provides a Python implementation of Causal Forests with Fixed Effects (CFFE) for estimating heterogeneous treatment effects in panel data settings. Standard causal forest methods struggle with panel data because unit…

Econometrics · Economics 2026-01-16 Harry Aytug

InferPy is a Python package for probabilistic modeling with deep neural networks. It defines a user-friendly API that trades-off model complexity with ease of use, unlike other libraries whose focus is on dealing with very general…

Machine Learning · Computer Science 2020-02-13 Javier Cózar , Rafael Cabañas , Antonio Salmerón , Andrés R. Masegosa

Integrated information theory provides a mathematical framework to fully characterize the cause-effect structure of a physical system. Here, we introduce PyPhi, a Python software package that implements this framework for causal analysis…

Neurons and Cognition · Quantitative Biology 2018-08-16 William G. P. Mayner , William Marshall , Larissa Albantakis , Graham Findlay , Robert Marchman , Giulio Tononi

NIFTY, "Numerical Information Field Theory", is a software package designed to enable the development of signal inference algorithms that operate regardless of the underlying spatial grid and its resolution. Its object-oriented framework is…

Instrumentation and Methods for Astrophysics · Physics 2013-06-06 Marco Selig , Michael R. Bell , Henrik Junklewitz , Niels Oppermann , Martin Reinecke , Maksim Greiner , Carlos Pachajoa , Torsten A. Enßlin

Soft Clustering plays a very important rule on clustering real world data where a data item contributes to more than one cluster. Fuzzy logic based algorithms are always suitable for performing soft clustering tasks. Fuzzy C Means (FCM)…

Computer Vision and Pattern Recognition · Computer Science 2014-06-17 Dibya Jyoti Bora , Anil Kumar Gupta

Fuzzy clustering has become a widely used data mining technique and plays an important role in grouping, traversing and selectively using data for user specified applications. The deterministic Fuzzy C-Means (FCM) algorithm may result in…

Neural and Evolutionary Computing · Computer Science 2018-10-23 Saptarshi Sengupta , Sanchita Basak , Richard Alan Peters

In addition to efficient statistical estimators of a treatment's effect, successful application of causal inference requires specifying assumptions about the mechanisms underlying observed data and testing whether they are valid, and to…

Methodology · Statistics 2020-11-10 Amit Sharma , Emre Kiciman

Possibilistic fuzzy c-means (PFCM) algorithm is a reliable algorithm has been proposed to deal the weakness of two popular algorithms for clustering, fuzzy c-means (FCM) and possibilistic c-means (PCM). PFCM algorithm deals with the…

Artificial Intelligence · Computer Science 2020-07-17 Rustam , Koredianto Usman , Mudyawati Kamaruddin , Dina Chamidah , Nopendri , Khaerudin Saleh , Yulinda Eliskar , Ismail Marzuki

The open-source python package diffpy.mpdf, part of the DiffPy suite for diffraction and pair distribution function analysis, provides a user-friendly approach for performing magnetic pair distribution function (mPDF) analysis. The package…

PHCpack is a large software package for solving systems of polynomial equations. The executable phc is menu driven and file oriented. This paper describes the development of phcpy, a Python interface to PHCpack. Instead of navigating…

Mathematical Software · Computer Science 2014-04-30 Jan Verschelde

Package managers such as NPM, Maven, and PyPI play a pivotal role in open-source software (OSS) ecosystems, streamlining the distribution and management of various freely available packages. The fine-grained details within software packages…

Software Engineering · Computer Science 2024-04-18 Xiaoyan Zhou , Feiran Liang , Zhaojie Xie , Yang Lan , Wenjia Niu , Jiqiang Liu , Haining Wang , Qiang Li