Related papers: Isomorphism Testing for T-graphs in FPT
Compatibility of unrooted phylogenetic trees is a well studied problem in phylogenetics. It asks to determine whether for a set of k input trees there exists a larger tree (called a supertree) that contains the topologies of all k input…
Lov\'asz (1967) showed that two graphs $G$ and $H$ are isomorphic if and only if they are homomorphism indistinguishable over the class of all graphs, i.e. for every graph $F$, the number of homomorphisms from $F$ to $G$ equals the number…
A graph $H$ is an induced subgraph of a graph $G$ if a graph isomorphic to $H$ can be obtained from $G$ by deleting vertices. Recently, there has been significant interest in understanding the unavoidable induced subgraphs for graphs of…
Motivated by the role of triadic closures in social networks, and the importance of finding a maximum subgraph avoiding a fixed pattern, we introduce and initiate the parameterized study of the Strong F-closure problem, where F is a fixed…
Subgraph isomorphism counting is known as #P-complete and requires exponential time to find the accurate solution. Utilizing representation learning has been shown as a promising direction to represent substructures and approximate the…
We work out the theory of fractional isomorphism of graphons as a generalization to the classical theory of fractional isomorphism of finite graphs. The generalization is given in terms of homomorphism densities of finite trees and it is…
We introduce (weak) oddomorphisms of graphs which are homomorphisms with additional constraints based on parity. These maps turn out to have interesting properties (e.g., they preserve planarity), particularly in relation to homomorphism…
For a graph property $\Pi$, Subgraph Complementation to $\Pi$ is the problem to find whether there is a subset $S$ of vertices of the input graph $G$ such that modifying $G$ by complementing the subgraph induced by $S$ results in a graph…
We give an isomorphism test for graphs of Euler genus $g$ running in time $2^{O(g^4 \log g)}n^{O(1)}$. Our algorithm provides the first explicit upper bound on the dependence on $g$ for an fpt isomorphism test parameterized by the Euler…
We study the complexity of the Graph Isomorphism problem on graph classes that are characterized by a finite number of forbidden induced subgraphs, focusing mostly on the case of two forbidden subgraphs. We show hardness results and develop…
This thesis studies the graph alignment problem, the noisy version of the graph isomorphism problem, which aims to find a matching between the nodes of two graphs which preserves most of the edges. Focusing on the planted version where the…
Given two tuples of subspaces, can you tell whether the tuples are isomorphic? We develop theory and algorithms to address this fundamental question. We focus on isomorphisms in which the ambient vector space is acted on by either a unitary…
We consider the problem of morphing between contact representations of a plane graph. In an $\mathcal F$-contact representation of a plane graph $G$, vertices are realized by internally disjoint elements from a family $\mathcal F$ of…
In \cite{Oh22}, the second author defined a complex of groups decomposition of the fundamental group of a finitely generated 2-dimensional special group, called an \emph{intersection complex}, which is a quasi-isometry invariant. In this…
We introduce the tree distance, a new distance measure on graphs. The tree distance can be computed in polynomial time with standard methods from convex optimization. It is based on the notion of fractional isomorphism, a characterization…
Graph pattern matching is often defined in terms of subgraph isomorphism, an NP-complete problem. To lower its complexity, various extensions of graph simulation have been considered instead. These extensions allow pattern matching to be…
A partial complement of the graph $G$ is a graph obtained from $G$ by complementing all the edges in one of its induced subgraphs. We study the following algorithmic question: for a given graph $G$ and graph class $\mathcal{G}$, is there a…
The commuting graph of a group $G$ is the graph whose vertices are the elements of $G$, two distinct vertices joined if they commute. Our purpose in this paper is twofold: we discuss the computational problem of deciding whether a given…
The symmetries of complex molecular structures can be modeled by the {\em topological symmetry group} of the underlying embedded graph. It is therefore important to understand which topological symmetry groups can be realized by particular…
We study two fundamental problems related to finding subgraphs: (1) given graphs G and H, Subgraph Test asks if H is isomorphic to a subgraph of G, (2) given graphs G, H, and an integer t, Packing asks if G contains t vertex-disjoint…