Related papers: An Improved Algorithm for The $k$-Dyck Edit Distan…
We study various aspects of Dyck words appearing in binary sequences, where $0$ is treated as a left parenthesis and $1$ as a right parenthesis. We show that binary words that are $7/3$-power-free have bounded nesting level, but this no…
The Fr\'echet distance is a computational mainstay for comparing polygonal curves. The Fr\'echet distance under translation, which is a translation invariant version, considers the similarity of two curves independent of their location in…
A distance matrix $A \in \mathbb R^{n \times m}$ represents all pairwise distances, $A_{ij}=\mathrm{d}(x_i,y_j)$, between two point sets $x_1,...,x_n$ and $y_1,...,y_m$ in an arbitrary metric space $(\mathcal Z, \mathrm{d})$. Such matrices…
We consider approximate circular pattern matching (CPM, in short) under the Hamming and edit distance, in which we are given a length-$n$ text $T$, a length-$m$ pattern $P$, and a threshold $k>0$, and we are to report all starting positions…
In the $k$-cut problem, we are given an edge-weighted graph $G$ and an integer $k$, and have to remove a set of edges with minimum total weight so that $G$ has at least $k$ connected components. The current best algorithms are an…
The discrete Fr\'echet distance is a useful similarity measure for comparing two sequences of points $P=(p_1,\ldots, p_m)$ and $Q=(q_1,\ldots,q_n)$. In many applications, the quality of the matching can be improved if we let $Q$ undergo…
Given a graph $G = (V, E)$ and an integer $k$, we study $k$-Vertex Seperator (resp. $k$-Edge Separator), where the goal is to remove the minimum number of vertices (resp. edges) such that each connected component in the resulting graph has…
Given a pattern of length $m$ and a text of length $n$, the goal in $k$-mismatch pattern matching is to compute, for every $m$-substring of the text, the exact Hamming distance to the pattern or report that it exceeds $k$. This can be…
In metric $k$-clustering, we are given as input a set of $n$ points in a general metric space, and we have to pick $k$ centers and cluster the input points around these chosen centers, so as to minimize an appropriate objective function. In…
In many applications, it is necessary to determine the similarity of two strings. A widely-used notion of string similarity is the edit distance: the minimum number of insertions, deletions, and substitutions required to transform one…
We consider the Euclidean $k$-means clustering problem in a dynamic setting, where we have to explicitly maintain a solution (a set of $k$ centers) $S \subseteq \mathbb{R}^d$ subject to point insertions/deletions in $\mathbb{R}^d$. We…
Approximating the length of the longest increasing sequence (LIS) of an array is a well-studied problem. We study this problem in the data stream model, where the algorithm is allowed to make a single left-to-right pass through the array…
Clustering is a fundamental problem in unsupervised machine learning with many applications in data analysis. Popular clustering algorithms such as Lloyd's algorithm and $k$-means++ can take $\Omega(ndk)$ time when clustering $n$ points in…
Given a point set S and an unknown metric d on S, we study the problem of efficiently partitioning S into k clusters while querying few distances between the points. In our model we assume that we have access to one versus all queries that…
We consider the streaming complexity of a fundamental task in approximate pattern matching: the $k$-mismatch problem. It asks to compute Hamming distances between a pattern of length $n$ and all length-$n$ substrings of a text for which the…
In this paper, we consider the following $k$-dispersion problem. Given a set $S$ of $n$ points placed in the plane in a convex position, and an integer $k$ ($0<k<n$), the objective is to compute a subset $S'\subset S$ such that $|S'|=k$ and…
In this paper, we provide new approximation algorithms for dynamic variations of the longest increasing subsequence (\textsf{LIS}) problem, and the complementary distance to monotonicity (\textsf{DTM}) problem. In this setting, operations…
The tree edit distance (TED) between two rooted ordered trees with $n$ nodes labeled from an alphabet $\Sigma$ is the minimum cost of transforming one tree into the other by a sequence of valid operations consisting of insertions, deletions…
The k-forest problem is a common generalization of both the k-MST and the dense-$k$-subgraph problems. Formally, given a metric space on $n$ vertices $V$, with $m$ demand pairs $\subseteq V \times V$ and a ``target'' $k\le m$, the goal is…
We study approximation algorithms for variants of the \emph{median string} problem, which asks for a string that minimizes the sum of edit distances from a given set of $m$ strings of length $n$. Only the straightforward $2$-approximation…