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A biologically motivated individual-based framework for evolution in network-structured populations is developed that can accommodate eco-evolutionary dynamics. This framework is used to construct a network birth and death model. The…

Populations and Evolution · Quantitative Biology 2021-03-19 Karan Pattni , Christopher E. Overton , Kieran J. Sharkey

Persistent homology, a technique from computational topology, has recently shown strong empirical performance in the context of graph classification. Being able to capture long range graph properties via higher-order topological features,…

Machine Learning · Computer Science 2024-12-20 Rubén Ballester , Bastian Rieck

With increasing game size, a problem of computational complexity arises. This is especially true in real world problems such as in social systems, where there is a significant population of players involved in the game, and the complexity…

Computer Science and Game Theory · Computer Science 2016-09-12 Tatsuya Iwase , Takahiro Shiga

Our starting point is the observation that if graphs in a class C have low descriptive complexity in first order logic, then the isomorphism problem for C is solvable by a fast parallel algorithm (essentially, by a simple combinatorial…

Computational Complexity · Computer Science 2007-05-23 Martin Grohe , Oleg Verbitsky

Research on the similarity of a graph to being a tree - called the treewidth of the graph - has seen an enormous rise within the last decade, but a practically fast algorithm for this task has been discovered only recently by Tamaki (ESA…

Data Structures and Algorithms · Computer Science 2019-05-06 Max Bannach , Sebastian Berndt

Coalition formation over graphs is a well studied class of games whose players are vertices and feasible coalitions must be connected subgraphs. In this setting, the existence and computation of equilibria, under various notions of…

Computer Science and Game Theory · Computer Science 2024-08-22 Angelo Fanelli , Laurent Gourvès , Ayumi Igarashi , Luca Moscardelli

We introduce two novel evolutionary formulations of the problem of coloring the nodes of a graph. The first formulation is based on the relationship that exists between a graph's chromatic number and its acyclic orientations. It views such…

Neural and Evolutionary Computing · Computer Science 2007-05-23 V. C. Barbosa , C. A. G. Assis , J. O. do Nascimento

The graph isomorphism problem is a main problem which has numerous applications in different fields. Thus, finding an efficient and easy to implement method to discriminate non-isomorphic graphs is valuable. In this paper, a new method is…

Combinatorics · Mathematics 2016-11-08 Ameneh Farhadian

In this report, we describe a novel graph invariant for computational graphs (colored directed acylic graphs) and how we used it to generate all distinct computational graphs up to isomorphism for small graphs. The algorithm iteratively…

Discrete Mathematics · Computer Science 2019-02-19 Chris Ying

Cournot dynamical game is studied on a graph. The stability of the system is studied. Prisoner's dilemma game is used to model natural gas transmission.

Computer Science and Game Theory · Computer Science 2012-08-23 E. Ahmed , M. I. Shehata , H. A. A. El-Saka

If the influence diagram (ID) depicting a Bayesian game is common knowledge to its players then additional assumptions may allow the players to make use of its embodied irrelevance statements. They can then use these to discover a simpler…

Computer Science and Game Theory · Computer Science 2017-04-10 Peter A. Thwaites , Jim Q. Smith

The growing popularity of dynamic applications such as social networks provides a promising way to detect valuable information in real time. Efficient analysis over high-speed data from dynamic applications is of great significance. Data…

Databases · Computer Science 2018-09-05 Youhuan Li , Lei Zou , M. Tamer Ozsu , Dongyan Zhao

In evolutionary game theory, repeated two-player games are used to study strategy evolution in a population under natural selection. As the evolution greatly depends on the interaction structure, there has been growing interests in studying…

Computer Science and Game Theory · Computer Science 2011-02-21 Colin Cooper , Martin Dyer , Velumailum Mohanaraj

Dynamically changing graphs are used in many applications of graph algorithms. The scope of these graphs are in graphics, communication networks and in VLSI designs where graphs are subjected to change, such as addition and deletion of…

Data Structures and Algorithms · Computer Science 2012-10-01 Megha Tyagi , Deepak Garg

We prove new theoretical results about several variations of the cop and robber game on graphs. First, we consider a variation of the cop and robber game which is more symmetric called the cop and killer game. We prove for all $c < 1$ that…

Discrete Mathematics · Computer Science 2017-11-01 Espen Slettnes , Carl Joshua Quines , Shen-Fu Tsai , Jesse Geneson

A new heuristic based on vertex invariants is developed to rapidly distinguish non-isomorphic graphs to a desired level of accuracy. The method is applied to sample subgraphs from an E.coli protein interaction network, and as a probe for…

Quantitative Methods · Quantitative Biology 2009-11-13 Kim Baskerville , Maya Paczuski

In this paper, we demonstrate that considering experiments in a graph-theoretic manner allows us to exploit automorphisms of the graph to reduce the number of evaluations of candidate designs for those experiments, and thus find optimal…

Methodology · Statistics 2018-02-28 Ben M. Parker , Steven G Gilmour , Vasiliki Koutra

In this paper, we introduce a novel unsupervised, graph-based filter feature selection technique which exploits the power of topologically constrained network representations. We model dependency structures among features using a family of…

Machine Learning · Computer Science 2023-07-04 Antonio Briola , Tomaso Aste

The classical "game of life" (GOL) due to Conway is a famous mathematical game constructed as a two-dimensional cellular automaton in which each cell is either alive or dead. A set of evolutionary rules determines whether a cell dies,…

Quantum Physics · Physics 2019-02-22 David Faux , Mayank Shah , Christopher Knapp

In this paper, a function on any pair of graphs is defined whose properties are similar to the properties of dot product in vector space. This function enables us to define graph orthogonality and, also, a new metric on isomorphism classes…

Combinatorics · Mathematics 2018-10-23 Ameneh Farhadian