English
Related papers

Related papers: Computational Study of Mechanochemical Activation …

200 papers

We study the effect of varying wiring in excitable random networks in which connection weights change with activity to mold local resistance or facilitation due to fatigue. Dynamic attractors, corresponding to patterns of activity, are then…

Disordered Systems and Neural Networks · Physics 2009-05-22 Samuel Johnson , J. Marro , Joaquin J. Torres

The dynamics of particles interacting by key-lock binding of attached biomolecules are studied theoretically. Examples of such systems include DNA-functionalized colloids as well as nanoparticles grafted with antibodies to cell membrane…

Soft Condensed Matter · Physics 2007-05-23 Nicholas A. Licata , Alexei V. Tkachenko

Topological protection has emerged as an organizing principle for understanding and engineering robust collective behavior in electronic and material systems. Recent work suggests that topology may also play a role in organizing stochastic…

Statistical Mechanics · Physics 2022-06-17 Pankaj Mehta , Jason Rocks

Active polymers possess numerous unique properties that are quite different from those observed in the system of small active molecule due to the intricate interplay between their activity and topological constraints. This study focuses on…

Soft Condensed Matter · Physics 2024-07-09 Jing Li , Bokai Zhang , Zhi-Yong Wang

We report Molecular Dynamics simulations for a new model of tetrahedral network glass-former, based on short-range, spherical potentials. Despite the simplicity of the forcefield employed, our model reproduces some essential physical…

Statistical Mechanics · Physics 2016-09-08 D. Coslovich , G. Pastore

Entangled states are ubiquitous amongst fibrous materials, whether naturally occurring (keratin, collagen, DNA) or synthetic (nanotube assemblies, elastane). A key mechanical characteristic of these systems is their ability to reorganise in…

This work presents an adaptive activation method for neural networks that exploits the interdependency of features. Each pixel, node, and layer is assigned with a polynomial activation function, whose coefficients are provided by an…

Computer Vision and Pattern Recognition · Computer Science 2018-11-22 Jinhyeok Jang , Jaehong Kim , Jaeyeon Lee , Seungjoon Yang

Topology optimization is an important basis for the design of components. Here, the optimal structure is found within a design space subject to boundary conditions. Thereby, the specific material law has a strong impact on the final design.…

Computational Engineering, Finance, and Science · Computer Science 2024-04-29 Miriam Kick , Philipp Junker

We report a molecular-dynamics simulation of a single-component system of particles interacting via a spherically symmetric potential that is found to form, upon cooling from a liquid state, a low-density porous crystalline phase. Its…

Materials Science · Physics 2014-12-17 Alfredo Metere , Peter Oleynikov , Mikhail Dzugutov , Michael O'Keeffe

Many cell functions require a concerted effort from multiple membrane proteins, for example, for signaling, cell division, and endocytosis. One contribution to their successful self-organization stems from the membrane deformations that…

Soft Condensed Matter · Physics 2023-06-21 Ali Azadbakht , Billie Meadowcroft , Juraj Májek , Anđela Šarić , Daniela J. Kraft

Transport of microscopic objects across biological membranes usually involves membrane deformation to enclose the object followed by detachment of the engulfed particle. However, in artificial membranes, this last topological remodelling…

Soft Condensed Matter · Physics 2025-03-25 Florent Fessler , Pierre Muller , Antonio Stocco

Simulations are used to examine the microscopic origins of strain hardening in polymer glasses. While traditional entropic network models can be fit to the total stress, their underlying assumptions are inconsistent with simulation results.…

Materials Science · Physics 2009-11-13 Robert S. Hoy , Mark O. Robbins

Liquid crystalline networks (LCNs) are stimuli-responsive materials formed from polymeric chains cross-linked with rod-like mesogenic segments, which, in the nematic phase, align along a non-polar director. A key characteristic of these…

Soft Condensed Matter · Physics 2025-06-30 Silvia Paparini , Giulio G. Giusteri , L. Angela Mihai

Understanding how topological constraints affect the dynamics of polymers in solution is at the basis of any polymer theory and it is particularly needed for melts of rings. These polymers fold as crumpled and space-filling objects and,…

Soft Condensed Matter · Physics 2017-11-15 D. Michieletto , N. Nahali , A. Rosa

We propose a physical model for the nonlinear inelastic mechanics of sticky biopolymer networks with potential applications to inelastic cell mechanics. It consists in a minimal extension of the glassy wormlike chain (GWLC) model, which has…

Soft Condensed Matter · Physics 2015-05-14 Lars Wolff , Pablo Fernandez , Klaus Kroy

Many biochemical and industrial applications involve complicated networks of simultaneously occurring chemical reactions. Under the assumption of mass action kinetics, the dynamics of these chemical reaction networks are governed by systems…

Dynamical Systems · Mathematics 2014-07-15 Matthew D. Johnston

We examine the structural relaxation of glassy materials at finite temperatures, considering the effect of activated rearrangements and long-range elastic interactions. Our three-dimensional mesoscopic relaxation model shows how the…

Soft Condensed Matter · Physics 2023-12-20 Gieberth Rodriguez-Lopez , Kirsten Martens , Ezequiel E. Ferrero

Motivated by the relevance of higher-order interactions in quantum physics and materials science at the nanoscale, recently a model has been introduced for new classes of networks that grow by the geometrically constrained aggregation of…

Algebraic Topology · Mathematics 2019-12-06 Bosiljka Tadic , Milovan Suvakov , Miroslav Andjelkovic , Geoff J. Rodgers

The non-Newtonian behaviors of dense suspensions are central to their use in technological and industrial applications and arise from a network of particle-particle contacts that dynamically adapts to imposed shear. Reported herein are…

Molecular linkers have emerged as an effective strategy to improve electronic transport properties on solution-processed layered materials via defect functionalization. However, a detailed discussion on the microscopic mechanisms behind the…