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The effect of mechanical interactions between cells in the spreading of bacterial populations was investigated in one-dimensional space. A continuum-mechanics approach, comprising cell migration, proliferation, and exclusion processes, was…

Biological Physics · Physics 2015-12-15 Waipot Ngamsaad , Suthep Suantai

Inspired by the collective phenomenon of territorial emergence, whereby animals move and interact through the scent marks they deposit, we study the dynamics of a 1D Brownian walker in a random environment consisting of confining boundaries…

Mathematical Physics · Physics 2015-08-17 Luca Giuggioli , Jonathan R. Potts , Stephen Harris

Microorganisms navigate through fluid, often confined by complex environments, to survive and sustain life. Inspired by this fact, we consider a model system and seek to understand the wall curvature driven dynamics of a squirmer, a…

Soft Condensed Matter · Physics 2021-08-25 Chaithanya K. V. S. , Sumesh P. Thampi

Run-and-tumble is a common but vital strategy that bacteria employ to explore environment suffused with boundaries, as well as to escape from entrapment. In this study we reveal how this strategy and the resulting dynamical behavior can be…

Soft Condensed Matter · Physics 2025-01-30 Premkumar Leishangthem , Xuan Wang , Junan Chen , Shengqi Yang , Xinliang Xu

We study active surface wetting using a minimal model of bacteria that takes into account the intrinsic motility diversity of living matter. A mixture of "fast" and "slow" self-propelled Brownian particles is considered in the presence of a…

Soft Condensed Matter · Physics 2023-02-08 Mauricio Rojas-Vega , Pablo de Castro , Rodrigo Soto

Many forms of cell motility rely on Brownian ratchet mechanisms that involve multiple stochastic processes. We present a computational and theoretical study of the nonequilibrium statistical dynamics of such a many-body ratchet, in the…

Statistical Mechanics · Physics 2014-11-06 Evan Hohlfeld , Phillip L. Geissler

The exceptional reactivity of animal collectives to predatory attacks is thought to be due to rapid, but local, transfer of information between group members. These groups turn together in unison and produce escape waves. However, it is not…

Populations and Evolution · Quantitative Biology 2015-06-05 James Herbert-Read , Jerome Buhl , Feng Hu , Ashley Ward , David Sumpter

Constructing physical models of living cells and tissues is an extremely challenging task because of the high complexities of both intra- and intercellular processes. In addition, the force that a single cell generates vanishes in total due…

Soft Condensed Matter · Physics 2019-05-09 Mitsusuke Tarama , Kenji Mori , Ryoichi Yamamoto

The narrow escape problem concerns the time needed for a diffusing particle to exit a confining domain through a small hole in the boundary. While this problem is now well-understood, determining the escape time for a particle that must…

Statistical Mechanics · Physics 2026-02-26 Victorya Richardson , Yick Hin Ling , Sean D Lawley

We investigate the outflux of ions through the channels in a cell membrane. The channels undergo an open/close cycle according to a periodic schedule. Our study is based both on theoretical considerations relying on homogenization theory,…

Analysis of PDEs · Mathematics 2014-11-21 D. Andreucci , D. Bellaveglia , E. N. M. Cirillo

The ability to control the location of nanoscale objects in liquids is essential for fundamental and applied research from nanofluidics to molecular biology. To overcome their random Brownian motion, the electrostatic fluidic trap creates…

We consider Brownian motion in a circular disk $\Omega$, whose boundary $\p\Omega$ is reflecting, except for a small arc, $\p\Omega_a$, which is absorbing. As $\epsilon=|\partial \Omega_a|/|\partial \Omega|$ decreases to zero the mean time…

Mathematical Physics · Physics 2007-05-23 A. Singer , Z. Schuss , D. Holcman

The existence of travelling waves for a model of concentration waves of bacteria is investigated. The model consists in a kinetic equation for the biased motion of cells following a run-and-tumble process, coupled with two…

Analysis of PDEs · Mathematics 2016-07-05 Vincent Calvez

We study the escape of a chain of coupled units over the barrier of a metastable potential. It is demonstrated that a very weak external driving field with suitably chosen frequency suffices to accomplish speedy escape. The latter requires…

Pattern Formation and Solitons · Physics 2015-06-18 D. Hennig , C. Mulhern , A. D. Burbanks , L. Schimansky-Geier

The L\'evy flight foraging hypothesis asserts that biological organisms have evolved to employ (truncated) L\'evy flight searches due to such strategies being more efficient than those based on Brownian motion. However, we provide here a…

Statistical Mechanics · Physics 2024-04-12 J. C. Tzou , Leo Tzou

Adsorption to a surface, reversible-binding, and trapping are all prevalent scenarios where particles exhibit "stickiness". Escape and first-passage times are known to be drastically affected, but detailed understanding of this phenomenon…

Statistical Mechanics · Physics 2023-12-06 Yuval Scher , Shlomi Reuveni , Denis S. Grebenkov

We study the dynamics of the passage of a stiff chain through a pore into a cell containing particles that bind reversibly to it. Using Brownian Molecular Dynamics simulations we investigate the mean-first-passage time as a function of the…

Soft Condensed Matter · Physics 2009-11-10 Roya Zandi , David Reguera , Joseph Rudnick , William M. Gelbart

Dynamical properties of a few ultra-cold fermions confined in a double-well potential is studied. We show that the dynamics, which is governed by single-particle tunnelings for vanishing interactions, is completely different for strong…

Quantum Gases · Physics 2016-03-24 Tomasz Sowiński , Mariusz Gajda , Kazimierz Rzążewski

Few- and many-fermion systems on the verge of stability, and consisting of strongly interacting particles, appear in many areas of physics. The theoretical modeling of such systems is a very difficult problem. In this work we present a…

Quantum Gases · Physics 2015-05-20 C. Forssén , R. Lundmark , J. Rotureau , J. Larsson , D. Lidberg

We study exclusion processes on the integer lattice in which particles change their velocities due to stickiness. Specifically, whenever two or more particles occupy adjacent sites, they stick together for an extended period of time, and…

Probability · Mathematics 2016-08-11 Miklós Z. Rácz , Mykhaylo Shkolnikov
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