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We introduce an efficient discretization of a novel fractional-order adaptive exponential (FrAdEx) integrate-and-fire model, which is used to study the fractional-order dynamics of neuronal activities. The discretization is based on…

Biological Physics · Physics 2025-11-13 Alexandru Fikl , Aman Jhinga , Eva Kaslik , Argha Mondal

In a recent paper (see [7]), a quasi-nonlocal coupling method was introduced to seamlessly bridge a nonlocal diffusion model with the classical local diffusion counterpart in a one-dimensional space. The proposed coupling framework removes…

Numerical Analysis · Mathematics 2021-05-04 Amanda Gute , Xingjie Helen Li

In this paper we study a system of advection-diffusion equations in a bulk domain coupled to an advection-diffusion equation on an embedded surface. Such systems of coupled partial differential equations arise in, for example, the modeling…

Numerical Analysis · Mathematics 2014-12-09 Sven Gross , Maxim A. Olshanskii , Arnold Reusken

We consider a strongly nonlinear PDE system describing solid-solid phase transitions in shape memory alloys. The system accounts for the evolution of an order parameter (related to different symmetries of the crystal lattice in the phase…

Analysis of PDEs · Mathematics 2013-07-08 Elena Bonetti , Pierluigi Colli , Mauro Fabrizio , Gianni Gilardi

We study a system of two coupled nonlinear parabolic equations. It constitutes a variant of the Keller-Segel model for chemotaxis, i.e. it models the behaviour of a population of bacteria that interact by means of a signalling substance. We…

Analysis of PDEs · Mathematics 2015-05-14 Jonathan Zinsl , Daniel Matthes

A structure-preserving implicit Euler finite-element scheme for a degenerate cross-diffusion system for ion transport is analyzed. The scheme preserves the nonnegativity and upper bounds of the ion concentrations, the total relative mass,…

Numerical Analysis · Mathematics 2018-12-17 Anita Gerstenmayer , Ansgar Jüngel

Many cell types exhibit oscillatory activity, such as repetitive action potential firing due to the Hodgkin-Huxley dynamics of ion channels in the cell membrane or reveal intracellular inositol triphosphate (IP$_3$) mediated calcium…

Cell Behavior · Quantitative Biology 2015-06-26 J. M. A. M. Kusters , J. M. Cortes , W. P. M. van Meerwijk , D. L. Ypey , A. P. R. Theuvenet , C. C. A. M. Gielen

We investigate the well-posedness of scalar conservation laws whose flux depends on the solution both pointwise and nonlocally through integral averages. Our analysis is based on a fixed-point formulation, in which the nonlocal dependence…

Analysis of PDEs · Mathematics 2026-04-13 Xiaoqian Gong , Alexander Keimer , Lorenzo Liverani , Hossein Nick Zinat Matin

Confining a liquid crystal imposes topological constraints on the orientational order, allowing global control of equilibrium systems by manipulation of anchoring boundary conditions. In this article, we investigate whether a similar…

We introduce economical versions of standard implicit ODE solvers that are specifically tailored for the efficient and accurate simulation of neural networks. These reformulations allow to achieve a significant increase in the efficiency of…

Numerical Analysis · Mathematics 2025-06-12 Luca Bonaventura , Soledad Fernández-García , Macarena Gómez-Mármol

We study a system of parabolic equations consisting of a double nonlinear parabolic equations of Forchheimer type coupled with a semilinear parabolic equations. The system describes a fluid-like driven system for active-passive pedestrian…

Analysis of PDEs · Mathematics 2019-12-30 T. K. Thoa Thieu , Matteo Colangeli , Adrian Muntean

Mathematical models for excitable cells are commonly based on cable theory, which considers a homogenized domain and spatially constant ionic concentrations. Although such models provide valuable insight, the effect of altered ion…

Computational Engineering, Finance, and Science · Computer Science 2019-11-11 A. J. Ellingsrud , A. Solbrå , G. T. Einevoll , G. Halnes , M. E. Rognes

Antiferroelectric liquid crystals can be considered as a promising alternative to nematic mixtures in the area of microdisplays. Switching behaviour of the molecules has been modelled as two adjacent smectic layers. However, some studies…

Soft Condensed Matter · Physics 2007-05-23 P. L. del Castillo , P. L. Lucas , N. Bennis , A. Spadlo , D. Rodriguez-Perez

The physics of critical phenomena in a many-body system far from thermal equilibrium is an interesting and important issue to be addressed both experimentally and theoretically. The trapped cold atoms have been actively used as a clean and…

Atomic Physics · Physics 2017-09-13 Geol Moon , Myoung-Sun Heo , Yonghee Kim , Heung-Ryoul Noh , Wonho Jhe

Analyzing qualitative behaviors of biochemical reactions using its associated network structure has proven useful in diverse branches of biology. As an extension of our previous work, we introduce a graph-based framework to calculate steady…

Classical Analysis and ODEs · Mathematics 2014-04-28 Inom Mirzaev , David Matthew Bortz

It is known from grand canonical simulations of a system of hard rods on two dimensional lattices that an orientationally ordered nematic phase exists only when the length of the rods is at least seven. However, a recent microcanonical…

Soft Condensed Matter · Physics 2018-02-14 Saugata Patra , Dibyendu Das , R. Rajesh , Mithun K. Mitra

In this paper we consider scalar parabolic equations in a general non-smooth setting with emphasis on mixed interface and boundary conditions. In particular, we allow for dynamics and diffusion on a Lipschitz interface and on the boundary,…

Analysis of PDEs · Mathematics 2015-01-30 Karoline Disser , Martin Meyries , Joachim Rehberg

Rapid transduction of sensory stimulation to action is essential for an animal to survive. To this end, most animals use the sub-second excitable and multistable dynamics of a neuromuscular system. Here, studying an animal without neurons…

Biological Physics · Physics 2021-07-08 Matthew S. Bull , Laurel A. Kroo , Manu Prakash

We propose a boundary element method for the accurate solution of the cell-by-cell bidomain model of electrophysiology. The cell-by-cell model, also called Extracellular-Membrane-Intracellular (EMI) model, is a system of reaction-diffusion…

Numerical Analysis · Mathematics 2024-06-28 Giacomo Rosilho de Souza , Rolf Krause , Simone Pezzuto

Nematic liquid crystals in a polyhedral domain, a prototype for bistable displays, may be described by a unit-vector field subject to tangent boundary conditions. Here we consider the case of a rectangular prism. For configurations with…

Mathematical Physics · Physics 2009-11-11 A. Majumdar , J. M. Robbins , M. Zyskin