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Capillary phenomena are involved in many industrial processes, especially those dealing with composite manufacturing. However, their modelling is still challenging. Therefore, a finite element setting is proposed to better investigate this…

Fluid Dynamics · Physics 2017-11-28 Julien Bruchon , Yujie Liu , Nicolas Moulin

Understanding the organization of reaction fluxes in cellular metabolism from the stoichiometry and the topology of the underlying biochemical network is a central issue in systems biology. In this task, it is important to devise reasonable…

Molecular Networks · Quantitative Biology 2009-11-13 C. Martelli , A. De Martino , E. Marinari , M. Marsili , I. Perez Castillo

CFD-DEM is used to simulate solid-fluid systems. DEM models the motion of discrete particles while CFD models the fluid phase. Coupling both necessitates the calculation of the void fraction and the solid-fluid forces resulting in a…

Fluid Dynamics · Physics 2023-01-06 Toni El Geitani , Shahab Golshan , Bruno Blais

The EMI (Extracellular-Membrane-Intracellular) model describes electrical activity in excitable tissue, where the extracellular and intracellular spaces and cellular membrane are explicitly represented. The model couples a system of partial…

Numerical Analysis · Mathematics 2023-07-06 Nanna Berre , Marie E. Rognes , Andre Massing

We present a GPU-friendly framework for real-time implicit simulation of elastic material in the presence of frictional contacts. The integration of hyperelasticity, non-interpenetration contact, and friction in real-time simulations…

Graphics · Computer Science 2025-03-20 Ziqiu Zeng , Siyuan Luo , Fan Shi , Zhongkai Zhang

We apply the finite element cell-centered (FECC) scheme [2] to the solution of the nearly incompressible elasticity problem. By applying a technique of dual mesh, such a low-order finite element scheme can be constructed from any given mesh…

Numerical Analysis · Mathematics 2014-06-10 T. T. P. Hoang , Ong Thanh Hai , H. Nguyen-Xuan

Bounded plasmas are characterized by a rapid but smooth transition from quasi-neutrality in the volume to electron depletion close to the electrodes and chamber walls. The thin non-neutral region, the boundary sheath, comprises only a small…

This paper presents a numerically exact cable finite element model for static nonlinear analysis of cable structures. The model derives the exact expression of the tension field using the geometrically exact beam theory coupled with the…

Computational Engineering, Finance, and Science · Computer Science 2025-05-20 Wenxiong Li , Qikun Huang , Suiyin Chen

In this article we consider the widely used immersed finite element method (IFEM), in both explicit and implicit form, and its relationship to our more recent one-field fictitious domain method (FDM). We review and extend the formulation of…

Numerical Analysis · Computer Science 2019-10-23 Yongxing Wang , Peter K. Jimack , Mark A. Walkley

We present an immersed boundary method to simulate the creeping motion of a rigid particle in a fluid described by the Stokes equations discretized thanks to a finite element strategy on unfitted meshes, called Phi-FEM, that uses the…

Numerical Analysis · Mathematics 2023-01-30 Michel Duprez , Vanessa Lleras , Alexei Lozinski

This paper presents existence and uniqueness results for a class of parabolic systems with non linear diffusion and nonlocal interaction. These systems can be viewed as regular perturbations of Wasserstein gradient flows. Here we extend…

Analysis of PDEs · Mathematics 2015-06-02 Maxime Laborde

We consider a class of liquid crystal free-boundary problems for which both the equilibrium shape and internal configuration of a system must simultaneously be determined, for example in films with air- or fluid-liquid crystal interfaces…

Soft Condensed Matter · Physics 2016-05-05 Andrew DeBenedictis , Timothy J Atherton

Plastic deformation of most crystalline materials is due to the motion of lattice dislocations. Therefore, the simulation of the interaction and dynamics of these defects has become state-of-the-art method to study work hardening, size…

Materials Science · Physics 2020-10-02 Gábor Péterffy , Péter Dusán Ispánovity

This paper studies a discrete-time version of the Lucas-Uzawa endogenous growth model with physical and human capital in the presence of externalities. Existence of an optimal equilibrium is proved using tools from dynamic programming with…

Theoretical Economics · Economics 2025-02-04 Luis Alcala

We study certain significant properties of the equilibrium configurations of a rigid body subject to an undamped elastic restoring force, in the stream of a viscous liquid in an unbounded 3D domain. The motion of the coupled system is…

Analysis of PDEs · Mathematics 2024-06-07 Denis Bonheure , Giovanni P. Galdi , Filippo Gazzola

We show how to combine in a natural way (i.e. without any test nor switch) the conservative and non conservative formulations of an hyperbolic system that has a conservative form. This is inspired from two different class of schemes: the…

Numerical Analysis · Mathematics 2021-10-27 Rémi Abgrall

Diffusive motion of regulatory enzymes on biopolymers with eventual capture at a reaction site is a common feature in cell biology. Using a lattice gas model we study the impact of diffusion and capture for a microtubule polymerase and a…

Biological Physics · Physics 2016-08-12 Emanuel Reithmann , Louis Reese , Erwin Frey

The present contribution investigates the well-posedness of a PDE system describing the evolution of a nematic liquid crystal flow under kinematic transports for molecules of different shapes. More in particular, the evolution of the {\em…

Analysis of PDEs · Mathematics 2015-05-28 Cecilia Cavaterra , Elisabetta Rocca

It is frequent for active or living entities to find themselves embedded in a surrounding medium. Resulting composite systems are usually classified as either active fluids or active solids. Yet, in reality, particularly in the biological…

Soft Condensed Matter · Physics 2025-11-07 Henning Reinken , Andreas M. Menzel

We develop robust and scalable fully implicit nonlinear finite element solvers for the simulations of biological transportation networks driven by the gradient flow minimization of a non-convex energy cost functional. Our approach employs a…

Computational Engineering, Finance, and Science · Computer Science 2025-04-08 Jan Haskovec , Peter Markowich , Simone Portaro , Stefano Zampini
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